| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2174 |
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| Symbol | |
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| ID | 4478378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2606780 |
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| End bp | 2607415 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639726770 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III |
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| Protein accession | YP_869810 |
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| Protein GI | 117920618 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.660077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAG AAAAACGCAT CCAAATCCTC ACCCGCCTTC GCGAAAACAA TCCCAAACCC
GAAACCGAGC TGAATTTCTC CAGTCCCTTT GAATTACTGG TGGCGGTGAC TTTATCAGCG
CAGGCGACCG ATGTGAGCGT GAATAAGGCG ACCGATAAAC TGTTTCCAGT CGCCAATACC
GCCCACAGCA TTTATGCCTT AGGCGTGGAT GGATTAAAGG AATATATCAA GACCATTGGC
CTGTATAACA ACAAGGCCAT CAATGTGATT AAAGCCTGTG AGATCTTGAT TAAAAAATAC
AATGGCGAAG TCCCAGAGGA CAGAGAAGCG CTAGAGTCGC TTCCTGGTGT CGGCCGTAAA
ACCGCTAACG TGGTGCTCAA TACCGCCTTT GGCTGGCCAA CCATCGCCGT CGATACCCAT
ATCTTTCGCA TGGCAAACCG CACTAAATTC GCCCCCGGTA AAAACGTGGT CGAAGTCGAG
GAGCGCATGT TAAAGGTTGT TCCCGCCGAA TTTAAAGTCG ATGTGCACCA CTGGTTTATT
CTGCATGGCC GCTATACCTG TCTGGCCCGC AAACCCCGCT GTGGCAGCTG CATTATTGAG
GACCTTTGCG AATACTCCCC ACTAAAAGAA AAGTAA
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| Protein sequence | MNQEKRIQIL TRLRENNPKP ETELNFSSPF ELLVAVTLSA QATDVSVNKA TDKLFPVANT
AHSIYALGVD GLKEYIKTIG LYNNKAINVI KACEILIKKY NGEVPEDREA LESLPGVGRK
TANVVLNTAF GWPTIAVDTH IFRMANRTKF APGKNVVEVE ERMLKVVPAE FKVDVHHWFI
LHGRYTCLAR KPRCGSCIIE DLCEYSPLKE K
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