Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2154 |
Symbol | |
ID | 4478350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2580903 |
End bp | 2583182 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639726742 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_869790 |
Protein GI | 117920598 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.136842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.840722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGACGA TTATAATTAT TGCCCTGATT GCGATTATTG CGCTGTTTGC AGTAAAGAGC CTTCGGATGC AATTTATCAC CCAGCCTGTG TTTCATTTCT TTAAAAAAGT ATTACCGCCA TTATCCGATA CCGAGCGCGA AGCGATGGAA GCGGGTGATG TGTGGTGGGA AGGCGAGTTA TTCCGTGGTA ACCCAAACTG GAATACCCTG CACAGCTACG GTAAACCAAC CCTGACGGCT GAAGAGAAAG ACTTTATCGA TAATCAGGTG ATGACCGCCC TGAAGATGAT CGATGATTTC GACATTGTGC ATAATCGTAA GGATTTGCCA CCAGAGCTGT GGGACTACTT TAAGAAAGAA GGCTTTTTTG CGCTGATCAT CCCGAAAAAG TTTGGTGGTC GTGCGTTTTC TGCCTACGCC AACTCGACGA TTGTGAGTAA ATTAGCCAGC CGCAGTGTGA GTGCTGCGGT CACTGTGATG GTGCCAAACT CATTAGGCCC AGGTGAGCTT TTGACTCATT ATGGTACCAA AGAGCAAAAG GAGCGCTGGT TACCTGCATT AGCTAAGGGT GATGAGATCC CATGTTTTGC ATTAACTGGC CCTGAAGCCG GTAGTGATGC GGGCGCTATC CCCGATGTGG GTATTGTTTG CCGTGGTGAG TTTAACGGTG AAGAAGTTTT AGGCCTGAAA TTAACCTGGG ACAAGCGTTA TATCACCCTC GCACCTGTGG CAACCGTATT AGGTTTAGCC TTCCAGATGC GCGACCCTGA TGGTTTGCTT GGCGATAAAA AGAATTTAGG TATTACCTGC GCCTTGATCC CTACCGATCA TCCTGGTGTG GTGATTGGGC GTCGTCATAA TCCGCTTAAC ATGGCGTTTA TGAACGGGAC TACTAAGGGC GAAGAAGTCT TTATTCCGCT GGATTGGATT ATCGGTGGTC CTGAGTTTGC GGGCAGAGGC TGGCGCATGC TGGTTGAATG TTTATCGGCG GGTCGCGGTA TTTCTCTGCC TGCATTGGCT ACCGCTTCTG GCCATATGGC GACCAAAACC ACCACGGCTT ACAGCTATGT GCGTCAGCAA TTTGGTATGG CGATTGGCAA CTTTGAAGGT GTGCAAGAAG CGCTGGCGCG CATTATCGCT AATACCTATC AATTGGAAGC GGCGCGCCGT TTAACCACAA CGGGTATTGA TCTTAAAGTT AAACCTTCAG TGGTGACGGC GATTGCTAAG TTCCACATGA CTGAACTGGG CCGCGCTGTG ATGAACGATG CGATGGATAT TCAGTCGGGT AAGGGTATCC AATTAGGACC TAAAAACTAC TTAGGCCACC CTTATATGTC GAATCCTATT TCGATTACCG TTGAAGGGGC GAATATTTTG ACGCGTTCCT TGATGATCTT TGGTCAAGGT GCGACCCGTT GCCATCCTTA TGTGTTGGCT GAAATGGAAG CCGCGGCGAT GGAAAACGAG CACGATGCGC TCGAGCGTTT CGACTCGCTG TTAATGGGCC ATATGGGTTA CGCCACTCGC AACGCGTTCA GTGCCTTATT CAACGCCTTG ACTGCCAGCC GTTTCGGCAG TGCGCCGGTG AGCGGCGATA CCAAGCAATA TTACAAAGAC ATGTCGCGCA TTTCATCGGC ATTAGCCTTG ATGACAGATA TTTCAATGCT GATCATGGGC GGCGATTTGA AGCGTAAGGA AATGTTGTCG GCACGTATGG GAGATGTGTT AAGCCAGCTG TACTTAGGCT CAGCCACCTT AAAACTGTTT GAAGACAATG GCCGTCAACA GGACGATTTA CCCGCGGTGC GTTATGTGAT GGCAAATCGC TTGCACTTAG CAGCTAAAGC GCTTGAAGAA GTGATCCGTA ACTTCCCGAA CCGCCCATTT GCATGGCTGC TACGTGCACT GATTTTCCCC ATCGGCAACC ATTTCAATGC GCCTAGCGAT AAAATGGCGA CTGAATTGGT CTCTGGCATG TTAAAACCGA GTCCTGCTCG TGAACGCATT ACTTTCCTAT GCCCAGAGTT TGAAGGCGAC GTGGGTGGTA TTGCAGAGGT TGAACAGGCC TTCGTGGCGC AATATGCCTG TAAAGAGATT TACAAGAAGC TCAAGAAAGC ACAACGCGCC GGTGAGTTGC CAGCCAAAGT GCCTAACTTA GTGTTATTTG CTAAAGCGCT GGAGCAGGGC ACTGTGACTC AAGATGAGCA TCAAAAGCTG TTACATGCCG ATAAGCTGCG CTTAGCGGCC ATCAATGTGA ATGATTTTGA AGCCTTATAA
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Protein sequence | MLTIIIIALI AIIALFAVKS LRMQFITQPV FHFFKKVLPP LSDTEREAME AGDVWWEGEL FRGNPNWNTL HSYGKPTLTA EEKDFIDNQV MTALKMIDDF DIVHNRKDLP PELWDYFKKE GFFALIIPKK FGGRAFSAYA NSTIVSKLAS RSVSAAVTVM VPNSLGPGEL LTHYGTKEQK ERWLPALAKG DEIPCFALTG PEAGSDAGAI PDVGIVCRGE FNGEEVLGLK LTWDKRYITL APVATVLGLA FQMRDPDGLL GDKKNLGITC ALIPTDHPGV VIGRRHNPLN MAFMNGTTKG EEVFIPLDWI IGGPEFAGRG WRMLVECLSA GRGISLPALA TASGHMATKT TTAYSYVRQQ FGMAIGNFEG VQEALARIIA NTYQLEAARR LTTTGIDLKV KPSVVTAIAK FHMTELGRAV MNDAMDIQSG KGIQLGPKNY LGHPYMSNPI SITVEGANIL TRSLMIFGQG ATRCHPYVLA EMEAAAMENE HDALERFDSL LMGHMGYATR NAFSALFNAL TASRFGSAPV SGDTKQYYKD MSRISSALAL MTDISMLIMG GDLKRKEMLS ARMGDVLSQL YLGSATLKLF EDNGRQQDDL PAVRYVMANR LHLAAKALEE VIRNFPNRPF AWLLRALIFP IGNHFNAPSD KMATELVSGM LKPSPARERI TFLCPEFEGD VGGIAEVEQA FVAQYACKEI YKKLKKAQRA GELPAKVPNL VLFAKALEQG TVTQDEHQKL LHADKLRLAA INVNDFEAL
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