Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2140 |
Symbol | |
ID | 4478336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2564299 |
End bp | 2565531 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639726728 |
Product | hypothetical protein |
Protein accession | YP_869776 |
Protein GI | 117920584 |
COG category | [S] Function unknown |
COG ID | [COG4394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000144093 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000349236 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCGCTTT TTTTATGTGT GCTCTCCCGA TTAATGAAAG CGATACACTC AATGGCAACC ACCGCTCCCC ACTGGGACAT CTTTTGCTGC GTCGTCGATA ATTACGGCGA TATCGGCGTC ACTTGGCGCT TAGCCAAACA GCTGGTCAAT GAATATCAGC TCCCCATTAC ACTCTGGGTC GATGACTTAA ACAGCTTCTC GCATATTTTA CCGAGCCTTG ACCCAAACCA AAGCAGCCAA GTCTTTAATG GCGTCACCAT CAATCATTGG ACAACACCCC TGCCCGTGGC ATTTGTGCCC GGCGCCGTGT TAATTGAAGC CTTTGCCTGC GAACTGCCTG ACGAGGTCAA ACAACAACTC ATCACGCTGC ACAGCACAAC ACCGCAAGCT GTGCCTGTAT GGCTTAATTT AGAATATTTA AGCGCCGAAG ACTGGGTCGA TGGCTGCCAT GGGTTACCCT CGATGCAGGC AAGCGGCATC AAAAAGTATT TCTTTTTCCC GGGTTTTACC CCAAAGACGG GTGGATTAAT CTGTGAGCGG GAGCTATTTG CCGAACGCGA TGCATGGCAA CAGGATAGCG TCAATAAATT GCAATTATTT GAGCGCCTTG GTCTTAAGGA TATTCAGGCG CAAGATACTG TCTACAGCGT CTTTAGTTAT GAAACTGATT CTCTGCCGGC CTTATGTGAA CTTTGGCAAG CCAGTGCAAC AAGCGATGCC AAAATCCATG CGCTTATTCC CAAGGGACGC AGCTTAAACA GCTTACAACA CTTATTACCC TGCAAGGTTG AGGCGCTCAG CCCCGGACAG CAAATTAAGC TAGGTCATTT GACCCTGCAT ATCTTGCCGA TGACTGACCA ACAAGGGTTC GACCGCCTGC TGTGGAGCTG CGACTTTAAT ATTGTCCGCG GTGAAGATAG CTTCTTGAGG GCGCAATGGG CCGCTAAACC CTTCATTTGG CATATTTATC CGCAAGAAGA TGATTATCAT CTAATAAAAT TAGAAGCTTT TATCCAACTT TACTGCGATA ATCTGCCCCC TGATATTGCC GACACTTGGT CTAAATTGAA TGTTGCATTT AACCAAGGCG AGCAATCTGC CGTGAAAACT CACTGGCAAA ACCTAAATCC TGTCAGTTTG CCACTCTTGC AACATGCTAA AGATTGGCCA ATTGACGCAA TAAATGCTGC AGATCTTGCG ACTCGGCTAG TCCAATTCGT CAAAAAAAGC TAA
|
Protein sequence | MPLFLCVLSR LMKAIHSMAT TAPHWDIFCC VVDNYGDIGV TWRLAKQLVN EYQLPITLWV DDLNSFSHIL PSLDPNQSSQ VFNGVTINHW TTPLPVAFVP GAVLIEAFAC ELPDEVKQQL ITLHSTTPQA VPVWLNLEYL SAEDWVDGCH GLPSMQASGI KKYFFFPGFT PKTGGLICER ELFAERDAWQ QDSVNKLQLF ERLGLKDIQA QDTVYSVFSY ETDSLPALCE LWQASATSDA KIHALIPKGR SLNSLQHLLP CKVEALSPGQ QIKLGHLTLH ILPMTDQQGF DRLLWSCDFN IVRGEDSFLR AQWAAKPFIW HIYPQEDDYH LIKLEAFIQL YCDNLPPDIA DTWSKLNVAF NQGEQSAVKT HWQNLNPVSL PLLQHAKDWP IDAINAADLA TRLVQFVKKS
|
| |