Gene Shewana3_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2140 
Symbol 
ID4478336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2564299 
End bp2565531 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content47% 
IMG OID639726728 
Producthypothetical protein 
Protein accessionYP_869776 
Protein GI117920584 
COG category[S] Function unknown 
COG ID[COG4394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000144093 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000349236 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGCTTT TTTTATGTGT GCTCTCCCGA TTAATGAAAG CGATACACTC AATGGCAACC 
ACCGCTCCCC ACTGGGACAT CTTTTGCTGC GTCGTCGATA ATTACGGCGA TATCGGCGTC
ACTTGGCGCT TAGCCAAACA GCTGGTCAAT GAATATCAGC TCCCCATTAC ACTCTGGGTC
GATGACTTAA ACAGCTTCTC GCATATTTTA CCGAGCCTTG ACCCAAACCA AAGCAGCCAA
GTCTTTAATG GCGTCACCAT CAATCATTGG ACAACACCCC TGCCCGTGGC ATTTGTGCCC
GGCGCCGTGT TAATTGAAGC CTTTGCCTGC GAACTGCCTG ACGAGGTCAA ACAACAACTC
ATCACGCTGC ACAGCACAAC ACCGCAAGCT GTGCCTGTAT GGCTTAATTT AGAATATTTA
AGCGCCGAAG ACTGGGTCGA TGGCTGCCAT GGGTTACCCT CGATGCAGGC AAGCGGCATC
AAAAAGTATT TCTTTTTCCC GGGTTTTACC CCAAAGACGG GTGGATTAAT CTGTGAGCGG
GAGCTATTTG CCGAACGCGA TGCATGGCAA CAGGATAGCG TCAATAAATT GCAATTATTT
GAGCGCCTTG GTCTTAAGGA TATTCAGGCG CAAGATACTG TCTACAGCGT CTTTAGTTAT
GAAACTGATT CTCTGCCGGC CTTATGTGAA CTTTGGCAAG CCAGTGCAAC AAGCGATGCC
AAAATCCATG CGCTTATTCC CAAGGGACGC AGCTTAAACA GCTTACAACA CTTATTACCC
TGCAAGGTTG AGGCGCTCAG CCCCGGACAG CAAATTAAGC TAGGTCATTT GACCCTGCAT
ATCTTGCCGA TGACTGACCA ACAAGGGTTC GACCGCCTGC TGTGGAGCTG CGACTTTAAT
ATTGTCCGCG GTGAAGATAG CTTCTTGAGG GCGCAATGGG CCGCTAAACC CTTCATTTGG
CATATTTATC CGCAAGAAGA TGATTATCAT CTAATAAAAT TAGAAGCTTT TATCCAACTT
TACTGCGATA ATCTGCCCCC TGATATTGCC GACACTTGGT CTAAATTGAA TGTTGCATTT
AACCAAGGCG AGCAATCTGC CGTGAAAACT CACTGGCAAA ACCTAAATCC TGTCAGTTTG
CCACTCTTGC AACATGCTAA AGATTGGCCA ATTGACGCAA TAAATGCTGC AGATCTTGCG
ACTCGGCTAG TCCAATTCGT CAAAAAAAGC TAA
 
Protein sequence
MPLFLCVLSR LMKAIHSMAT TAPHWDIFCC VVDNYGDIGV TWRLAKQLVN EYQLPITLWV 
DDLNSFSHIL PSLDPNQSSQ VFNGVTINHW TTPLPVAFVP GAVLIEAFAC ELPDEVKQQL
ITLHSTTPQA VPVWLNLEYL SAEDWVDGCH GLPSMQASGI KKYFFFPGFT PKTGGLICER
ELFAERDAWQ QDSVNKLQLF ERLGLKDIQA QDTVYSVFSY ETDSLPALCE LWQASATSDA
KIHALIPKGR SLNSLQHLLP CKVEALSPGQ QIKLGHLTLH ILPMTDQQGF DRLLWSCDFN
IVRGEDSFLR AQWAAKPFIW HIYPQEDDYH LIKLEAFIQL YCDNLPPDIA DTWSKLNVAF
NQGEQSAVKT HWQNLNPVSL PLLQHAKDWP IDAINAADLA TRLVQFVKKS