Gene Shewana3_2138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2138 
Symbol 
ID4478334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2563415 
End bp2563687 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content44% 
IMG OID639726726 
ProductLexA regulated protein 
Protein accessionYP_869774 
Protein GI117920582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000822243 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000610258 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCAAAAG AAGCAACAGA TAGAACAACC ATTGACCTTT TTGCCAATGA AAAGCGCCGG 
GGCCGCCCAC GTAGCAATCC TTTGTCCCGT AGCCAGCAAC TTAAGGTCAA TAAGCGCAAC
CAGATCCAGC GGGATAAAGC CAAAGGATTA AAGCGAATAG AGTTAAAGGT GTCACAAGAT
TTATATGACG CCTTGAATGA GCAGGCATTG GCCAGTAACA TCAGCCGAAG CCAGTTAATC
GAATTAATTC TTCAGCAAAA AATAGAATGC TGA
 
Protein sequence
MAKEATDRTT IDLFANEKRR GRPRSNPLSR SQQLKVNKRN QIQRDKAKGL KRIELKVSQD 
LYDALNEQAL ASNISRSQLI ELILQQKIEC