Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2135 |
Symbol | |
ID | 4478331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2561457 |
End bp | 2562008 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639726723 |
Product | replication initiation regulator SeqA |
Protein accession | YP_869771 |
Protein GI | 117920579 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3057] Negative regulator of replication initiationR |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00104581 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000741326 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAATACA TCGAAGTGGA TGAAGAGCTC TATCGTCATA TTGCCAGCAA AACGGAACGT ATTGGTGAGA GCGCCTCTGA CATTCTCCGT CGATTACTCG GCCTGTCCGT CGATGCGGTT GAACAGGCGC AGCCACAGGC CATTAGCCAA CCGAGTTTAG AGGCAACGAC GCCTGAGCCA CAGATAGCAC CTCAGATAGA AACCTTAGTC TCTGCGACCG ATTTCAATCA ATTGGTGGAT GAGCATAAGT TAGAGCAGCA AAAAGGCGCC GTGGGTCGTT TCTTATTCTT GCTCGAGAGT TTATATCAAC AGAGCCAAGC GCAATTCTCG CAAATTTTGC AGATCCAAGG TCGCGATCGA CTCTATTTTG CGCGCTCACG GGAAGAGTTA CTCAAGGCCA GTGCTACCGC CAACCCCAAG GAAATCGGTA ATACCGGATT TTGGGTCACG ACCAACAATA ACACCGCCAA AAAACGGGCG ATTTTAGTCG AAGCCTTAAT GCAATTTGGC TGCGATGCCC AAATCGCCAA CGGCATTGCC GAACGCGTAT AA
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Protein sequence | MKYIEVDEEL YRHIASKTER IGESASDILR RLLGLSVDAV EQAQPQAISQ PSLEATTPEP QIAPQIETLV SATDFNQLVD EHKLEQQKGA VGRFLFLLES LYQQSQAQFS QILQIQGRDR LYFARSREEL LKASATANPK EIGNTGFWVT TNNNTAKKRA ILVEALMQFG CDAQIANGIA ERV
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