| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2131 |
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| Symbol | |
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| ID | 4478327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2556482 |
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| End bp | 2557660 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726719 |
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| Product | dehydrogenase, E1 component |
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| Protein accession | YP_869767 |
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| Protein GI | 117920575 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.457956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000397469 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAAAG CAACACTCAA CACTGATACA GTGCACCGTG TCGGCTTCTT GGATAAGGCA
TCGCTTCACA TTCCTATCCT TCGAATTCTA CAAGCAGACG GCACTACCTA TGAAACCGCG
GTTTTGCCTG TAATAGATGA AGCCTTAGCC ACCAAAATTT ACGATACTTG CGTATTCACG
CGGGTACTCG ACGAACGTAT GTTAGGCGCA CAGCGTCAGG GACGGATCAG CTTCTATATG
ACCTGTACGG GTGAAGAAGC GGCGATCGTC GGCAGTGTCG CGGCGCTTGA TCAAGAAGAT
GTGATCCTCG CGCAATATCG TGAACATGCG GCGCTGCGTT ACCGTGGTTT TACCACTGAG
CAGTTTATGA ACCAAATGTT CAGCAATGAG AAGGACTTAG GTAAAGGTCG CCAAATGCCA
ATTCACTACG GCTGCGCGGC GTTAAACTAC CAAACCATTT CATCGCCACT GGCCACGCAA
ATCCCGCAAG CGACAGGTGT CGGTTATAGC CTGAAAATGC AGGGCAAACG TAATGTTGCC
GTCTGTTATT TCGGTGAAGG CGCTGCCTCT GAAGGTGACT TCCACGCAGG CTTGAATATG
GCTGCGGTGT TAAAATGCCC GGTGATTTTC TTCTGCCGTA ACAATGGTTA TGCGATTTCC
ACCCCAACAG AAGAACAGTT TGCCGGTAAC GGTATCGCTA GCCGCGGTGT GGGTTACGGT
ATGCACACCA TTCGTGTCGA CGGTAACGAT ATGCTGGCGG TGTTAGCGGC GACGCAACAG
GCGCGTGCCT ATGCAATTGA GCATAATGCT CCCGTGTTGA TTGAAGCCAT GACTTATCGC
CTTGGCGCGC ACTCATCTTC TGACGATCCT TCTGGCTATC GCTCCAAAGA AGAAGAGGCA
AAATGGCAGC AACACGATCC AGTCAAACGC TTCAAGTTAT GGTTGATCAA CAAAGGCTGG
TTGGCCGAGG CCGATGATGC CCAGCGTTAC GAAAAGTACC GTGAAGAAGT GTTAGCCGCC
GTTAAAGTCG CTGAAAAATT ACCTATCCCT ATGCTGGATG AGATCATTGA AGATGTGTAC
GACAAGCCAA CACCAGCGCT GAAAAAGCAG CTGAGTGAAC TTAAAGAACA CATCAAGAAA
TATCCGCAAT CCTATCCCAA AAGTGCAGGG AGGCTATAA
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| Protein sequence | MSKATLNTDT VHRVGFLDKA SLHIPILRIL QADGTTYETA VLPVIDEALA TKIYDTCVFT
RVLDERMLGA QRQGRISFYM TCTGEEAAIV GSVAALDQED VILAQYREHA ALRYRGFTTE
QFMNQMFSNE KDLGKGRQMP IHYGCAALNY QTISSPLATQ IPQATGVGYS LKMQGKRNVA
VCYFGEGAAS EGDFHAGLNM AAVLKCPVIF FCRNNGYAIS TPTEEQFAGN GIASRGVGYG
MHTIRVDGND MLAVLAATQQ ARAYAIEHNA PVLIEAMTYR LGAHSSSDDP SGYRSKEEEA
KWQQHDPVKR FKLWLINKGW LAEADDAQRY EKYREEVLAA VKVAEKLPIP MLDEIIEDVY
DKPTPALKKQ LSELKEHIKK YPQSYPKSAG RL
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