Gene Shewana3_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2117 
Symbol 
ID4479525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2540707 
End bp2541675 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content48% 
IMG OID639726702 
ProductC32 tRNA thiolase 
Protein accessionYP_869753 
Protein GI117920561 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0387293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAG CTATGTCTGA AGTTACGGCG AGTCAAATGC CTGAAGAATT ATCAAAAAAA 
CAAATTACCC GTCTGAATAA ATTACAGAAG CGTCTGCGCC GTGAAGTGGG TAGTGCCATC
GCCGATTACA ACATGATTGA AGATGGCGAC CGAGTCATGT GCTGCTTAAG TGGCGGTAAA
GACAGTTACG CCATGCTGGA TATTCTGCTT AATCTACAGC AGCGCGCGCC CGTACAGTTC
GAAATTATTG CCGTTAATTT AGATCAAAAG CAGCCGGGTT TCCCTGAACA CGTACTGCCA
GCCTATTTAG ACAGCCTTAA TATTCCCTAT CACATCCTCG AGAAAGACAC TTACTCGATT
GTGAAAGAAA AGATCCCTGA AGGCAAAACC ACTTGCTCGC TGTGCTCTCG CCTGCGTCGC
GGTACTCTCT ATGGCTTTGC CCAGCGCATT GGCGCAACCA AAATCGCACT AGGCCACCAC
AGAGACGATA TTATTGAGAC CATGTTCCTC AACATGTTCT ACGGCGGCAA GATGAAAGCC
ATGCCACCTA AGTTGCTCTC GGACGACGGC GCTAACGTGG TTATTCGTCC ACTCGCCTAT
TGCCGCGAAA AGGATTTAGA AGAATATGCG GAATTGAAAA AATTCCCCAT CATTCCCTGT
AATCTTTGTG GCTCGCAGGA AAACCTCAAG CGTCAAGCAG TGAAAGACAT GCTCAATCAG
TGGGATAGAC TCTACCCAGG CCGTATTGAA ACTATTTTCA CCGCCATGCA AAACACTGCC
CCTTCACAGG GTGTTGACCG TGAGCAGTTT GACTTTGTGT CGTTGAAACG CGATCCCAAC
GCGCCAATGA AGGGTGATGT GGCCGAAGCC GATTTACCCG CATTTGACTT TTTGGATATC
GCCAACAGCG GCCATATCGA TTTAGATGCG GCAAAACGCA TCAATATCGT CAACGTTTAC
GAAGCGTAA
 
Protein sequence
MLEAMSEVTA SQMPEELSKK QITRLNKLQK RLRREVGSAI ADYNMIEDGD RVMCCLSGGK 
DSYAMLDILL NLQQRAPVQF EIIAVNLDQK QPGFPEHVLP AYLDSLNIPY HILEKDTYSI
VKEKIPEGKT TCSLCSRLRR GTLYGFAQRI GATKIALGHH RDDIIETMFL NMFYGGKMKA
MPPKLLSDDG ANVVIRPLAY CREKDLEEYA ELKKFPIIPC NLCGSQENLK RQAVKDMLNQ
WDRLYPGRIE TIFTAMQNTA PSQGVDREQF DFVSLKRDPN APMKGDVAEA DLPAFDFLDI
ANSGHIDLDA AKRINIVNVY EA