| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2086 |
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| Symbol | |
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| ID | 4476332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2500940 |
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| End bp | 2504305 |
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| Gene Length | 3366 bp |
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| Protein Length | 1121 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639726671 |
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| Product | beta-xylosidase-like protein |
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| Protein accession | YP_869722 |
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| Protein GI | 117920530 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00280414 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000469917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTGCTTA AACGCTCATT CGTGTCAGCA AGCTTGATCA TGGCACTAGC CTCCTGTGGT
GGGGACGACA GCAGCTATAG TGCAGACGAC ACAAATACCT TTACACTTCC TCCCCCTATG
ACATCGGCGG ATCCGATAAT TGCAGGTGAG GTGAGCTACA AAAATGCAGT GGTTCATGAT
CCTTCCATCA TTAAAGATAC CGATGGCACC TATTATGTTT TCGGCTCCCA CCTCGCGGTG
GCCAGTTCTA CTGATTTAAT GAACTGGACA CAAATTGCCT CAGATGGTGC AGCCGAGAGC
AGCCTGTTCA ATACCTATGA GTCAGAAATC GCGGAAGGCA CCGCATGGAC GGGTGGCTTT
GTTGGCTCGT GGGCACCGGA TGTGATAAAG CTTGCCGACG GTAAGTACCA TTTCTATTAC
GACTTCTGTG GCGGCCCCGA TAAGATTGAT TGCGTATCGC GCTCCTATCT GGGGATGGCC
ACCTCTGACA ATATTTTAGG CCCTTATGTT AACCAAGGCT TGATCCTGAA ATCAGGTCAA
GAGGGGGCTG AAAACCCTGG CGCAAACGGT CAAATTTACG ATGGCTTTGT CGACCCTAAC
GCTATCGATC CCGCCGTGTT TTACGATAAA GATGGCGGTC TATGGATGAC CTATGGTTCC
TATTCCGGCG GGATCTGGGT GATGCAGTTA GACCCTGCAA CGGGTAAACC GTTACCTGAT
CAGGGCTATG GCACTAAGAT CATGGGTGGT AACTACAGTG CCATCGAAGG GTCTTATGTT
ATATACAGCC CTGAATCTGA ATACTATTAT ATGTTTACCT CTTTTGGCGG CTTCGCCCAA
AAAGACGGTT ACAACATTCG TATCTCTCGC GCTAAAAATC CTAACGGTCC CTATGTGGAT
GCCGCGGGTC TGGACATGAT TGGCGCAACG GCCGCAGGCA ATATCGCCGA CTATGGCGTC
AAACTGATGG GCGGCTTCCA ATTTGTGGCC CACCCGGGCG ATGTGGGCCA TGATCATGGT
TACCTGTCAC CCGGCCACAA CTCCGCTTTT TATGATGCAC AAACGGGCAA ATACTTCTTA
GTATTCCATA CGCGCTTCCC CGATACCGGC GAAGGTCACA GCGTGCGCGT ACATGAGCTA
TTTCTCAACA GCGATGGTTG GTTAGTTGCC TCACCACAGC GTTATGCACC GATCAACGGC
GCTAACATTG TCGATGAAAT CGATGTCACC GGTGATTATC AATTTATTAA TCACGCAAAA
AATATTAATA CCGCGGCACA CAAATCAGTC CATGTGAAGT TATCCCGTAC TTGGACCAAT
AAAGGTACAG TCTCTGGCGA TGTAACAGGT ACTTACCAAC AGGGCGATGA TAACCAAATC
ACCTTAATGT TAGACAATTT AGGCACGTTT GAAGGCGTAC TCGCTTGGCA GTGGGACCCT
GAGCAAAATA AACTTATGCC GACGTTTAGC GCCATTTCTA ATGATGGGGC GAGTATTTGG
GGCGTGAAGC TCACCGATAA AACCACTGAG GAAATTTTAT CGGCATCGGC AAACGGCATT
AGCCTGCCGA CCGAAGCTAC CGAAGGCACG ATCGACTTAC CGACAAATGG TACCCGTGGG
GCGACTATCG AGTGGCAATC GAGCGATGAG TCAGTGATCC GTGCCGATGG CACCATTATC
CGACCCAACG TTGGCGAGGG CGATAAGGTC GTGACCTTGA CCGCGACAAT TATGGTCAAT
GGTAAGAAGG TGACTAAAAC CTTCCAAATT ACCGTATTTG CCCATAAAAC CTATAACCGT
ATTGCCCACT ACAGCTTCGA GAATAACCTC AAGGATTCCC TAGGCTTATT TAGTGATGGT
CAACCCACTG GCGATAGGAT CTTCAAAGCG GGTGATGCCA TTGGTTACGC CACAGGCTTT
GAAGGACAAG CCCTATCATT AGATGGTGCC CACGGGGTGT TACTGCCATC GGGCATTATC
TCCAGCTACG AGTACACAGT GTCTTTCTGG GCAAGTCCTG CGGTTATCAC AGGATTTACC
ACGGCATTCT TCGGCGCAGT TAACGAGCAA ACCGCTGAAG ATGGTAGCAA GTTCTCCAAT
ACCTGGGTCA GCTTGCTGCC ACAGGGCTGG GACGGTAATA CCATGTTCTG GAGCCATAAT
ATCGATACCA GTGGCAGCTC AGTACTGGAG ACCTGGTTTG ATGGTGTAAT GGGTGAGCGC
ATCGCTGAAA ACACTTGGTC GCATCTGGCG TTCTCCGTCA ATAAAGGGCT CGTTAAAGTC
TTTATCAACG GGGTTGAGCG CTTTAGCAGC GGTAACCTTG CCAACTACTT TACGGGGGCT
CAGGGCGTTT TCGGTCTTGG GGTTAACTAC TGGGATGTTC CATACAACGG CCTTATCGAT
GAGCTAAAAG TATATGAAGC GGCATTAACG GCTGAAGAAG TCAAAGCCCT CGATATCGAC
AAGTTAGCCG ATAGTGAACT CTTGTCCTCA GCAACGGCCA TTCTGGAGCT AGGCGACTTA
TCGGCGGTGC GTGAAAATAT CGAACTGCCA GTAACGGGTC CTTATGCTTC GGCCATTTCA
TGGGAATCGT CAGATCCAAC GACTATTGAT ACTCATGGTG GCGTAACGCA ACCTGTTCGT
GGTGAAGAAG ACAAGGTTGT CACCTTAACG GCGACCTTAA AACTGGGTAA TGCGACCCAA
ACCAAAGTCT TCACGGCAAC CGTTAAAGCT AAGAATCCGC CAACACCGGT CGCAATCTAT
AGTTTTGAAG ACAATCTTAA CGACAGTACC GCTAACTTCG GTGCGGGCAC TGTAGTGGGT
AACCTGATTG GCGTTGAAGG CGGTAAAATC AGCTATGTGG ATGGCGCGGT AGGCAAGGCG
GCGGTCTTTG ATGGTGCCTC TGGTATTGTA TTGCCGAATA ACCTTATCAA AGACTACACC
TATTCAGTGT CAATGTGGCT CAACCCTGAG CAGCTGAATA AGTACACTAC AGCCTTGTTT
GGTTATGCGA CGGATTCCAG CTGGACCAGC GTCTTACCAG GCGGTCAAAA TGATTATGAG
CGCATGGTGT TATGGTCAGG CACAGCATGG TACGACGGTA GAACTGGTTT TGTGATGCCA
AAATCCCAAT GGACGCACCT TGCGTACACA GTGAATGGCG GCGAGGTGAA GGTCTATATC
AATGGTGAAT TGAAGTTTAC CGGCGCGAAC TTCCCGAACA TATTCTCAGT ACCGACCACT
AAGTTTGCGG TTGGGGTCAA CTTCTGGGAT GCACCTTTTA AAGGGGCAAT CGATGAAATC
AAGTTCTATG ACGAAGCGAT TACTGAGCAA GATGTAGCTG ATTTATTTGG TGAATCTAAT
CAATAA
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| Protein sequence | MVLKRSFVSA SLIMALASCG GDDSSYSADD TNTFTLPPPM TSADPIIAGE VSYKNAVVHD
PSIIKDTDGT YYVFGSHLAV ASSTDLMNWT QIASDGAAES SLFNTYESEI AEGTAWTGGF
VGSWAPDVIK LADGKYHFYY DFCGGPDKID CVSRSYLGMA TSDNILGPYV NQGLILKSGQ
EGAENPGANG QIYDGFVDPN AIDPAVFYDK DGGLWMTYGS YSGGIWVMQL DPATGKPLPD
QGYGTKIMGG NYSAIEGSYV IYSPESEYYY MFTSFGGFAQ KDGYNIRISR AKNPNGPYVD
AAGLDMIGAT AAGNIADYGV KLMGGFQFVA HPGDVGHDHG YLSPGHNSAF YDAQTGKYFL
VFHTRFPDTG EGHSVRVHEL FLNSDGWLVA SPQRYAPING ANIVDEIDVT GDYQFINHAK
NINTAAHKSV HVKLSRTWTN KGTVSGDVTG TYQQGDDNQI TLMLDNLGTF EGVLAWQWDP
EQNKLMPTFS AISNDGASIW GVKLTDKTTE EILSASANGI SLPTEATEGT IDLPTNGTRG
ATIEWQSSDE SVIRADGTII RPNVGEGDKV VTLTATIMVN GKKVTKTFQI TVFAHKTYNR
IAHYSFENNL KDSLGLFSDG QPTGDRIFKA GDAIGYATGF EGQALSLDGA HGVLLPSGII
SSYEYTVSFW ASPAVITGFT TAFFGAVNEQ TAEDGSKFSN TWVSLLPQGW DGNTMFWSHN
IDTSGSSVLE TWFDGVMGER IAENTWSHLA FSVNKGLVKV FINGVERFSS GNLANYFTGA
QGVFGLGVNY WDVPYNGLID ELKVYEAALT AEEVKALDID KLADSELLSS ATAILELGDL
SAVRENIELP VTGPYASAIS WESSDPTTID THGGVTQPVR GEEDKVVTLT ATLKLGNATQ
TKVFTATVKA KNPPTPVAIY SFEDNLNDST ANFGAGTVVG NLIGVEGGKI SYVDGAVGKA
AVFDGASGIV LPNNLIKDYT YSVSMWLNPE QLNKYTTALF GYATDSSWTS VLPGGQNDYE
RMVLWSGTAW YDGRTGFVMP KSQWTHLAYT VNGGEVKVYI NGELKFTGAN FPNIFSVPTT
KFAVGVNFWD APFKGAIDEI KFYDEAITEQ DVADLFGESN Q
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