| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2083 |
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| Symbol | |
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| ID | 4476329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2494497 |
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| End bp | 2496401 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639726668 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_869719 |
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| Protein GI | 117920527 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3940] Predicted beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000179948 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000321687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACTCACA CAATCAACAA ACGAATGGCG ACGCTTGCGC TGGCCATGGG ACTTAGTGCG
ACCTGCTTGG GGGCAGGTAA CCTATATGCC GCAGAGAGTG CGAAGGGCGC GGATGAAAAC
CGCATTACCG CAGCGACCTT TGCCAATCCG TTATTTCGAA ATGGAGCCGA TCCTTGGCTC
GAATACCACA ATGGTAACTA TTATCTCACC ACCACCACGT GGACCTCTGA GCTGGTGATG
CGTAAATCGC CCACCATTGC AGGGCTTGCC TATGCGCCAG CCCACAATAT TTGGAGTGGC
ACAGATAAAT CCAACTGCTG TAACTTTTGG GCGTTCGAAT TCCACCCACT GCAAACTGCG
CAGGGATTAC GTTGGTATGT AATTTACACC TCGGGCGTGG CAGAAAACTT CGATGGCCAG
CGTAACCATA TCCTCGAGAG TGAAGGCAGC GACCCTATGG GGCCATACAA GTTTAAGGGC
ACACCAATGC CCGACCACTG GAATATCGAC GGCAGCTATT TGGAGTATAA AGGCCAGTTA
TATTTCCTCT GGTCCGAATG GCATGGCCAA GATCAAGTCA ACTTGATTGC CAAGATGAGC
AACCCTTGGA CCGTCGAGGG CGAACATAAG GTGATCACAG CGCCCATTCA CGACTGGGAA
AAATCAGGCT TAAACGTCAA CGAAGGCCCT GAAATCATCC AGCATGAGGG CAGAACTTTC
TTAGTTCACT CGGCAAGCTT TTGTAACACT GAGGATTATT CCTTGGCCGT GGTTGAACTC
ACCGGTGACG ATCCTATGGA TCCCGCCGCA TGGACTAAGT ACGACAAGCC TTTCTTTAGC
AAGGCCAATG GTGTCTATGG CCCTGGCCAC CATGGTTTCT TCAAGTCTCC CGATGGGAAA
GAAGATTGGC TCATTTACCA TGGCAACTCC TCGGCCTCCG ACGGCTGTAG TGGTACCCGT
GCGGCACGTG CTCAACCCTT TACTTGGGAT AACGAAGGCT TGCCTAAATT TGGCGAACCA
ATGGCGGATA AAAAGCAGTT GCCAGTCCCA AGTGGCGAGT TTGGTCCGAT AACCACCCAG
GTGGAAGGCG TGAAATACCG CATCGTGAGC CGTGAAGTCG GTCAATGCCT AGTGACCAAT
GCCAAGGGGC AGGTCAGTGT CGGTAAGTGC GAGGATGACA ACAGCCAATG GGTAATTGAT
CCGAGTAACG ATGGCCTGTA TCGCTTTGCT AATGTGGGTC AGGGAACCTT TTTAACTCAG
GCTCAGTGCC AAGATGAGTC TTCAACGGCA CTGAATACTG CGCCTTGGGT CGCCTCCCGT
TGTCAGCGTT GGTCGGTGGA TTCGACTCGC GAGGGCTGGT TCCGTTTCGC AAACGATCGC
TCCATCGGCA ATCTGCAGGT GAAAAACTGC AGTAAAAAGG CTGGCGCCGA GGTGATTGCC
GGGGAAAACC GTGTCAGTGA ATGCACCGAT TGGCGGATTG AGCCAGTCTC AACATTTGCC
ATAGTCAACG CCCATAGCGG CCGAGTGGTC AGCGCCGAAC AATGTCAGCT TAAACCTAAT
GCCAATGTGG CTCAGTTTGA ATACACCGGC GATGCCTGTC AGCAGTGGCA AGCCATGCCG
ACAACCGATG GATTTTACCG TCTACAATCC ATCCAACGTT CAAACAACAA GGCGCAACAA
TGCCTTGTGA CCAACGAAGG TAATCTGGAG CTAGGGGCTT GTACTGCAAT CGACAGCGAG
TTCCGTAGCG AGTTGATGCC TAATGGCTCA TTAAGGCTAG TGTCCCGTAA GGGCGGTTCG
TCGATGAAAG TGGCCAATGG CTCCTATGCC AATGGCGATA ACATAGTGGA GGACGTGTGG
AAAAACACCA TTTCACAACA GTTCTATTTT AGAGAGGTGA AATAA
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| Protein sequence | MTHTINKRMA TLALAMGLSA TCLGAGNLYA AESAKGADEN RITAATFANP LFRNGADPWL
EYHNGNYYLT TTTWTSELVM RKSPTIAGLA YAPAHNIWSG TDKSNCCNFW AFEFHPLQTA
QGLRWYVIYT SGVAENFDGQ RNHILESEGS DPMGPYKFKG TPMPDHWNID GSYLEYKGQL
YFLWSEWHGQ DQVNLIAKMS NPWTVEGEHK VITAPIHDWE KSGLNVNEGP EIIQHEGRTF
LVHSASFCNT EDYSLAVVEL TGDDPMDPAA WTKYDKPFFS KANGVYGPGH HGFFKSPDGK
EDWLIYHGNS SASDGCSGTR AARAQPFTWD NEGLPKFGEP MADKKQLPVP SGEFGPITTQ
VEGVKYRIVS REVGQCLVTN AKGQVSVGKC EDDNSQWVID PSNDGLYRFA NVGQGTFLTQ
AQCQDESSTA LNTAPWVASR CQRWSVDSTR EGWFRFANDR SIGNLQVKNC SKKAGAEVIA
GENRVSECTD WRIEPVSTFA IVNAHSGRVV SAEQCQLKPN ANVAQFEYTG DACQQWQAMP
TTDGFYRLQS IQRSNNKAQQ CLVTNEGNLE LGACTAIDSE FRSELMPNGS LRLVSRKGGS
SMKVANGSYA NGDNIVEDVW KNTISQQFYF REVK
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