Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2081 |
Symbol | |
ID | 4476327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2491773 |
End bp | 2493218 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639726666 |
Product | sugar (glycoside-Pentoside-hexuronide) transporter |
Protein accession | YP_869717 |
Protein GI | 117920525 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0834729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000228967 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTATC ATAAATTGTC AGTCATTGAA AAGATCGGTT ACGGCTCCGG GGACATGGCC GTTAACGTGG TGATTTCGTC AATGATGTTA ATTATTACCT TCTTTTATAC CGATATTTTT GGGTTAAAGC CCGCCGATGT CGGGATATTG TTCCTGCTGG TTCGTCTTAT CGATGCCATT ACCGATCCTT TAATGGGCAT TATTAACGAT AAAGTGACGA CCCGCTGGGG AAGATATCGC CCCTACTTCC TGTTTATGGC GATTCCCTTT GGTATTTCGG TGTTCTTAAC CTTCTCAACC CCAGATTGGG ATTACAATGC CAAACTTATC TGGGCCTATT CGACTTATAT TCTGGTCACT ATCATCTTTA CCACTGTCAC TATTCCGTAT ATTTCGATTA TCAGCGTGAT CACCGACGAT CCAAAAGAGC GGTTATCCGC CAACGGTTAT CGTTTGTTCT TCGCCAAGAT TGCCGCCTTT TTAGTGACCA TTATCGTGCC TATATTGGCG TCTGCCTGGG GCGGAGAGAA CATTGCCGCG GGCTATCAAA AAGCCATGGG CGTGATGGCA TTGATGGCAA CCCTACTGTT TTTATTCTGC TTTTTTACTA CCACAGAGCG CGTGGCCTAC AAGGTGGAAA CTAAGCCTGT TGGCATGCAA CTGCGATTAT TGTTCAAAAA CGATCAATGG TTAGTACTAG TCGCGATTTG TGTGATTGGC ACCATTGGCT ATGTGATCCG CGGCTCGGTA GCAGCCTACT ACGCGACCTA TTACTTGGGC GGCGATGCCA AGATGCTCTC GGCATTCCTG TCGACCGGTG TTGGTGCAGC GATTCTTGCG ATGGTCGCTT CAACTTGGAT CACTAAGCGT TACTGCAAAC TAAAACTCTT CCGCTACAGC CAAATCGTGG TTGGGATCTT AAGCGCCATC ATGTTCTTTG CCGTGCAGCC GGGCGACATA GTGCTGGCCT TCGTACTCTA CTTTGCGATT TCATTCGTGG TGGATTTACA TGCGCCTGTC TTCTGGTCGG TGATTTCCGA GTCGGTGGAT TATGGCACAG TCAAAACGGG CCACAGGGTC TCTGGCCTTG CCTTTGGCGG GATCTCATTC GCCCAAAAAG CGGGTATGGG CGCGGCGGGA TTTGTGGTGG GTATGCTACT GACCTACTTC AACTATCAAC CCGGTGAAAC TCAAAGCGAA TTTGCGTTGA CCGGTATTTC GTTAATGCTA ACGGTGATCC CTGGCGCATT CCACGCGCTG ATGGGCTTAC TGATGTTCAA ATACAAGATT TCTGATCGCG TTTATGAAGA AATCAAACAG GCTTTGCCCG AGCAGGCGCA TGTTAGCCAA ACGGACGCCA AGCAGACGTC TAAGGCTATA GCCTCAGACA CTGTAACTGC TGAGACAGTA ACGCCTAAGA CTGCTGCGCC CCAAGTATCG GCGTAA
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Protein sequence | MSYHKLSVIE KIGYGSGDMA VNVVISSMML IITFFYTDIF GLKPADVGIL FLLVRLIDAI TDPLMGIIND KVTTRWGRYR PYFLFMAIPF GISVFLTFST PDWDYNAKLI WAYSTYILVT IIFTTVTIPY ISIISVITDD PKERLSANGY RLFFAKIAAF LVTIIVPILA SAWGGENIAA GYQKAMGVMA LMATLLFLFC FFTTTERVAY KVETKPVGMQ LRLLFKNDQW LVLVAICVIG TIGYVIRGSV AAYYATYYLG GDAKMLSAFL STGVGAAILA MVASTWITKR YCKLKLFRYS QIVVGILSAI MFFAVQPGDI VLAFVLYFAI SFVVDLHAPV FWSVISESVD YGTVKTGHRV SGLAFGGISF AQKAGMGAAG FVVGMLLTYF NYQPGETQSE FALTGISLML TVIPGAFHAL MGLLMFKYKI SDRVYEEIKQ ALPEQAHVSQ TDAKQTSKAI ASDTVTAETV TPKTAAPQVS A
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