Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2074 |
Symbol | |
ID | 4476320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2482251 |
End bp | 2483750 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639726659 |
Product | ABC transporter related |
Protein accession | YP_869710 |
Protein GI | 117920518 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.144534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000031172 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCTTA TTTTAGAACT CAAGCAGATC AGTAAGCATT ATCCGGGCGT CAAAGCCCTT GAGGATGTGA GCTTACGGTT ATTTGCGGGG GAAGTTCACG CCCTATTGGG CGAAAACGGT GCGGGTAAAT CGACGCTGGT GAAAGTGATG ACAGGCGCCC AGTCAAAAGA CATGGGCGAC ATCCTCTTTC TTGGCGAGCC GCAACACTTC AACACACCGA TGGATGCGCA AAAGGCGGGG ATCAGCACGG TTTATCAGGA GGTGAACTTA GTGCCTAACC TGACCGTGGC ACAAAACCTG TTCCTCGGTT ACGAACCGCG CCGCCTTGGG CTGATCCATT TTAAAAAAAT GTATGCCGAC GCGCGGGCCG TGTTAACTCA GTTCAAGCTG GATATCGATG TTAGCGCGCC GCTGTCGGAT TATTCCATCG CGGTGCAGCA ACTGATCGCC ATCGCCCGCG GTGTTGCCAT GTCGGCCAAG GTATTAGTGC TCGATGAGCC TACCGCGAGC TTAGATGCCA AAGAAGTGCA AGTACTGTTT GGGATCTTAA ACCAGCTCAA AGCCAAGGGC GTGGCTATCG TGTTTATCAC TCACTTCCTC GATCAGGTTT ATCAGATAAG CGATCGCATT ACCGTGTTAC GTAACGGGCA GTTTATCGGC GAATATCTGA CGGCAGAACT GCCACAGCCT AAGCTAATTG AAGCCATGCT CGGGCGGTCT CTGCAGGAGC AATTGGTTGA TAAACAGGAA AAGGAGCGCA CCGTCACCCG CGCAGAGGCC GTGCTCTTGT CCCTCGAAGA TGTGTCGGTG AAAGGCTCAA TCCAATCGAT GAATCTCACC GTGCCCAAAG GGCAGGCAGT CGGGCTTGCG GGGCTGCTAG GCTCTGGGCG CAGCGAAGTC TGCAACGCCG TGTTTGGGCT GGACTTGGTC GATAGCGGCA GTATCCATTT GGCTGGGCAG AAACTGAATC TGTCTCAACC CGTGGATGCG ATCAGCGCCG GGATCGCCCT GTGCCCCGAA GATCGCAAGA TTGACGGCAT CATCGGTCCT TTATCGATTC GCGAAAACAT TATTCTCGCG CTGCAGGCGC GTATCGGGTG GTGGCGGTAT TTATCCAACA CGCGGCAGCA GGAAATTGCC CAGTTCTTTA TCGATAAATT ACAGATTGCG ACCCCAGATG CGGATAAACC CATAGAGCAA TTGAGTGGCG GTAATCAGCA GAAGGTGATC CTCGCGCGTT GGTTAGCCAT CGAACCCATC CTGCTCGTGC TGGATGAGCC GACCCGGGGT ATCGATATTG GCGCCCACGC CGAAATCGTC AAGCTTATCA GAACTTTGTG TGATGAAGGC ATGTCGCTGC TGGTTGCATC GTCTGAGCTC GATGAGCTCG TGGCCTTTTC AAATAAAGTC GTGGTATTAC GCGACAGATA TGCAGTACGT GAACTTTCAG GAGCGGAATT AACCTCGCAA CACGTAATGC AAGCGATTGC GGAGGGATAA
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Protein sequence | MSLILELKQI SKHYPGVKAL EDVSLRLFAG EVHALLGENG AGKSTLVKVM TGAQSKDMGD ILFLGEPQHF NTPMDAQKAG ISTVYQEVNL VPNLTVAQNL FLGYEPRRLG LIHFKKMYAD ARAVLTQFKL DIDVSAPLSD YSIAVQQLIA IARGVAMSAK VLVLDEPTAS LDAKEVQVLF GILNQLKAKG VAIVFITHFL DQVYQISDRI TVLRNGQFIG EYLTAELPQP KLIEAMLGRS LQEQLVDKQE KERTVTRAEA VLLSLEDVSV KGSIQSMNLT VPKGQAVGLA GLLGSGRSEV CNAVFGLDLV DSGSIHLAGQ KLNLSQPVDA ISAGIALCPE DRKIDGIIGP LSIRENIILA LQARIGWWRY LSNTRQQEIA QFFIDKLQIA TPDADKPIEQ LSGGNQQKVI LARWLAIEPI LLVLDEPTRG IDIGAHAEIV KLIRTLCDEG MSLLVASSEL DELVAFSNKV VVLRDRYAVR ELSGAELTSQ HVMQAIAEG
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