Gene Shewana3_2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2061 
Symbol 
ID4476306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2466934 
End bp2467845 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content52% 
IMG OID639726645 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_869697 
Protein GI117920505 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0159337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.7985e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGCTA TGCTCTCGGA ACAAGCGTTA GAACTCATTG ATATCGTGGC CCGGGTGGGG 
AGTTTTACGG CGGCAGCCAA TCGACTGCAC AAGGTCCCTT CTGCGGTCAG TTATGCCGTT
AAACAAATCG AAGAAGAACT TGGTGTAGTG TTATTTGAGC GCCACCACCG CAGCGTGACC
TTGACCCCCG CGGGAGAGCA TTTTGTTAAG CAAGCCAGAA ACTTGCTGAC TCAAATGGAT
GAGATGAAAC GCGGCACCCA GCGTGTGGCC AACGGCTGGC AACCCACGCT GTCTATCGCC
TTAGATAACA TAGTGCGCGC CGACAGAATT AGCGTATTAA TCGCCGACTT TTACCGTCAT
TTCCAAGATA TCGAGCTCAT CATCCGCATC GAGGTCTTTA ACGGCGTGTG GGAGGCGCTT
GCGACTGGTC GCAGTGATAT CGCCATTGGC GCAACCACTG CTATCCCTGT GGGGGGCGTA
TACCAATATA AGGACATGGG CGATATTCAA TGGGCATTTT TGGTGAGTAA AAACCATCCT
TTAGCCAGTA TTGATCGCCC CTTGACCGAT GATGAACTGC GTCCCTTCCC CTCCATTTGT
TTGGAAGATA CCTCGCGGGA AATTCCTAAG CGCATGACCT GGTTATTGGA GAATCAACGC
AGACTCGTGG TGCCGGATTG GATCCGCGCG ATTAACTGCT TTAGAGAGGG ATTAGGCATC
GGCTATATGC CCGTTCATTT AGCCAGCGTA TTTATCAAAG CGGGCGCCTT GGTTGAAAAG
CAGCTTGAAA ATCCTAAATT AACCAGCCCC TGCTGCCTAG CTTGGAACGC CGATAAGATG
TCGCCCGCCC TCGCCTGGGT GCTCGACTAC TTAGGAGATA CCGATAAGTT ACACCGAGAA
TGGCTGGCGT AA
 
Protein sequence
MSAMLSEQAL ELIDIVARVG SFTAAANRLH KVPSAVSYAV KQIEEELGVV LFERHHRSVT 
LTPAGEHFVK QARNLLTQMD EMKRGTQRVA NGWQPTLSIA LDNIVRADRI SVLIADFYRH
FQDIELIIRI EVFNGVWEAL ATGRSDIAIG ATTAIPVGGV YQYKDMGDIQ WAFLVSKNHP
LASIDRPLTD DELRPFPSIC LEDTSREIPK RMTWLLENQR RLVVPDWIRA INCFREGLGI
GYMPVHLASV FIKAGALVEK QLENPKLTSP CCLAWNADKM SPALAWVLDY LGDTDKLHRE
WLA