Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2060 |
Symbol | |
ID | 4476305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2466015 |
End bp | 2466674 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639726644 |
Product | hypothetical protein |
Protein accession | YP_869696 |
Protein GI | 117920504 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00317153 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000338815 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTCAGC AAACCTTGTA CTCAGCTAGT GCATCCACCC TAGAAGTGAA TAAACTTCTT AAAAATACCT ATTTATTGTT GGCCATGACC CTCGCCTTCT CGGCATTGTG TGCAGGCTTA GCGATGGCAC TCAATATCAG CCCTCTGATG TCACTCGGTT TATCTATCGG TGGTTTAGTG CTGTTGTTCG TTACCCTACG CAAAGCCGAC TCCGCTGCGG GCATCTTCTG GGTATTTGCA TTTACCGGTA TGGAAGGCGC CTCATTAGGT TATATGCTTA ACCACTACGC CGGCATGACC AATGGCTCTG AGCTTATCAT GCAAGCTTTA GGATTAACCT CGGTTATCTT TATTGCACTC TCGGCCTATG CAGTCACAAC GAAGAAAGAT TTCTCTTTCC TACGTGGTTT CCTGTTCGCC GGATTGATTG TGGTGATCGC TGCTGCGCTG ATTAACATTT TCGTGGGTAA CAGTGTGGCC TTTATGGCGA TTAACGCGGG TCTTGCGCTG TTAATGACCG GCTTTATCTT GTTCGATACT AGCCGTATCG TGAATGGCGG CGAGACCAAC TATATCCGCG CCACTATCTC CTTGTATCTG GACTTTTTAA ACCTGTTCAT TGCCATTTTG CATTTGCTTG GCATTGGTAA CGATGATTAA
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Protein sequence | MTQQTLYSAS ASTLEVNKLL KNTYLLLAMT LAFSALCAGL AMALNISPLM SLGLSIGGLV LLFVTLRKAD SAAGIFWVFA FTGMEGASLG YMLNHYAGMT NGSELIMQAL GLTSVIFIAL SAYAVTTKKD FSFLRGFLFA GLIVVIAAAL INIFVGNSVA FMAINAGLAL LMTGFILFDT SRIVNGGETN YIRATISLYL DFLNLFIAIL HLLGIGNDD
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