Gene Shewana3_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2060 
Symbol 
ID4476305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2466015 
End bp2466674 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content47% 
IMG OID639726644 
Producthypothetical protein 
Protein accessionYP_869696 
Protein GI117920504 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00317153 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000338815 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTCAGC AAACCTTGTA CTCAGCTAGT GCATCCACCC TAGAAGTGAA TAAACTTCTT 
AAAAATACCT ATTTATTGTT GGCCATGACC CTCGCCTTCT CGGCATTGTG TGCAGGCTTA
GCGATGGCAC TCAATATCAG CCCTCTGATG TCACTCGGTT TATCTATCGG TGGTTTAGTG
CTGTTGTTCG TTACCCTACG CAAAGCCGAC TCCGCTGCGG GCATCTTCTG GGTATTTGCA
TTTACCGGTA TGGAAGGCGC CTCATTAGGT TATATGCTTA ACCACTACGC CGGCATGACC
AATGGCTCTG AGCTTATCAT GCAAGCTTTA GGATTAACCT CGGTTATCTT TATTGCACTC
TCGGCCTATG CAGTCACAAC GAAGAAAGAT TTCTCTTTCC TACGTGGTTT CCTGTTCGCC
GGATTGATTG TGGTGATCGC TGCTGCGCTG ATTAACATTT TCGTGGGTAA CAGTGTGGCC
TTTATGGCGA TTAACGCGGG TCTTGCGCTG TTAATGACCG GCTTTATCTT GTTCGATACT
AGCCGTATCG TGAATGGCGG CGAGACCAAC TATATCCGCG CCACTATCTC CTTGTATCTG
GACTTTTTAA ACCTGTTCAT TGCCATTTTG CATTTGCTTG GCATTGGTAA CGATGATTAA
 
Protein sequence
MTQQTLYSAS ASTLEVNKLL KNTYLLLAMT LAFSALCAGL AMALNISPLM SLGLSIGGLV 
LLFVTLRKAD SAAGIFWVFA FTGMEGASLG YMLNHYAGMT NGSELIMQAL GLTSVIFIAL
SAYAVTTKKD FSFLRGFLFA GLIVVIAAAL INIFVGNSVA FMAINAGLAL LMTGFILFDT
SRIVNGGETN YIRATISLYL DFLNLFIAIL HLLGIGNDD