Gene Shewana3_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2056 
Symbol 
ID4476301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2464582 
End bp2464920 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content46% 
IMG OID639726640 
Productformate dehydrogenase 
Protein accessionYP_869692 
Protein GI117920500 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2920] Dissimilatory sulfite reductase (desulfoviridin), gamma subunit 
TIGRFAM ID[TIGR03342] sulfur relay protein, TusE/DsrC/DsvC family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0328837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0003026 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTAAATC CGCTTATATT TAATGGCGTC GAAATTGAAC GCGACCATCA AGGCTATTTG 
AAGAATATCG CCGACTGGCA GCCGGATATG GCGCCGCTAT TAGCCCAAGA AGAACAGATT
GAACTGACCA GTGCCCACTG GGAAGTGGTC AATTTTGTTC GGGATTTTTA TCTGGAATAT
AAAACCAGCC CTGCGATCAG AGTGTTAGTC AAAGCCATTG GTCAAGCCTT AGGGCCGGAT
AAAGGTAACT CTAAGTACCT CTATACCCTT TTTCCGGTGG GTCCTGCCAA ACAGGCAACA
AAGATTGCGG GTTTGCCTAA ACCTGCCAAG TGTATTTAA
 
Protein sequence
MVNPLIFNGV EIERDHQGYL KNIADWQPDM APLLAQEEQI ELTSAHWEVV NFVRDFYLEY 
KTSPAIRVLV KAIGQALGPD KGNSKYLYTL FPVGPAKQAT KIAGLPKPAK CI