Gene Shewana3_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2054 
Symbol 
ID4476299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2463087 
End bp2464373 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content49% 
IMG OID639726638 
Productseryl-tRNA synthetase 
Protein accessionYP_869690 
Protein GI117920498 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00569868 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000126187 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAGATC CTAAATTTTT GCGCAACGAA TTAGCAGTTA CCGCTGAGCG ATTAGCTACC 
CGTGGTTTTA TTTTAGATGT CGCTCATCTC ACTCAATTAG AAGAAAAACG TAAGTCACTG
CAAGTGGCGA CTGAAGAGTT ACAAGCTTCG CGTAATGCTA TTTCCAAGTC CATCGGACAA
GCAAAAGCCC GCGGCGAAGA TGTGGATGCC ATCATGGCGC AGGTTGGCGA TTTAGGTGCG
CAATTAGATG CGAAGAAAGT CGAGCTGGCC GCGGTACTTG AAGAAGTGAA CGCGATTGCT
ATGTCGATGC CAAACCTGCC AGATGAGTCT GCGCCTATCG GTGCTGATGA GACTGAAAAC
GTCGAAATCC GTCGTTGGGG CACACCACGC AGCTTCGATT TCCCAGTTAA AGATCATATC
GATTTAGGTG AAGGCCTAAA CGGTTTAGAT TTCAAAAGCG CAGTGAAAAT CACTGGTTCA
CGTTTTATCG TCATGAAGGG CCAAATCGCC CGTTTAAACC GCGCATTAGG TCAGTTCATG
TTAGATCTGC ACACTACTGA GCACGGTTAT ACCGAAGCTT ACGTACCATT ACTGGTTAAC
GAAGCAAGTT TACTGGGTAC TGGCCAATTA CCGAAGTTTG GTGAAGACTT GTTCCACACT
AAACCTGCGA CCGAAGAAGG CCAAGGCTTA AGCCTGATCC CAACCGCAGA AGTGCCATTA
ACGAACCTAG TGCGTGACAG CATTGTCGAT GAAGATGAAT TGCCGATTAA GTTAACCGCG
CATACCGCTT GTTTCCGCAG TGAAGCGGGC TCATACGGTA AAGATACCCG TGGTCTTATC
CGTCAGCACC AATTCGATAA AGTGGAATTA GTGCAACTGG TTAAGCCCGA AGACTCAATG
GCGGCGCTCG AAGCGCTAAC TGGCCACGCT GAAACCGTGC TGCAACGCCT AGGTCTGCCA
TACCGCACAG TGATCCTGTG TACCGGTGAC ATGGGCTTTG GCTCAAGCAA AACCTACGAT
ATCGAAGTGT GGTTACCAGG TCAAAACACT TACCGTGAGA TCTCTTCATG TTCAAACATG
AAGGACTTCC AAGCACGTCG TATGCAAGCA CGTTACCGCG TTAAGGCAGA TAACAAGCCT
GCATTGCTGC ACACCTTAAA CGGCTCAGGC CTCGCGGTAG GTCGTACTTT AGTTGCGATT
TTAGAGAACT ATCAAAATGC CGATGGTAGC GTGACCATTC CTGAAGCACT GCGCCCATAC
ATGGGTGGAC TGACTCAGAT CGGTTAA
 
Protein sequence
MLDPKFLRNE LAVTAERLAT RGFILDVAHL TQLEEKRKSL QVATEELQAS RNAISKSIGQ 
AKARGEDVDA IMAQVGDLGA QLDAKKVELA AVLEEVNAIA MSMPNLPDES APIGADETEN
VEIRRWGTPR SFDFPVKDHI DLGEGLNGLD FKSAVKITGS RFIVMKGQIA RLNRALGQFM
LDLHTTEHGY TEAYVPLLVN EASLLGTGQL PKFGEDLFHT KPATEEGQGL SLIPTAEVPL
TNLVRDSIVD EDELPIKLTA HTACFRSEAG SYGKDTRGLI RQHQFDKVEL VQLVKPEDSM
AALEALTGHA ETVLQRLGLP YRTVILCTGD MGFGSSKTYD IEVWLPGQNT YREISSCSNM
KDFQARRMQA RYRVKADNKP ALLHTLNGSG LAVGRTLVAI LENYQNADGS VTIPEALRPY
MGGLTQIG