Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2054 |
Symbol | |
ID | 4476299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2463087 |
End bp | 2464373 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639726638 |
Product | seryl-tRNA synthetase |
Protein accession | YP_869690 |
Protein GI | 117920498 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00569868 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000126187 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTAGATC CTAAATTTTT GCGCAACGAA TTAGCAGTTA CCGCTGAGCG ATTAGCTACC CGTGGTTTTA TTTTAGATGT CGCTCATCTC ACTCAATTAG AAGAAAAACG TAAGTCACTG CAAGTGGCGA CTGAAGAGTT ACAAGCTTCG CGTAATGCTA TTTCCAAGTC CATCGGACAA GCAAAAGCCC GCGGCGAAGA TGTGGATGCC ATCATGGCGC AGGTTGGCGA TTTAGGTGCG CAATTAGATG CGAAGAAAGT CGAGCTGGCC GCGGTACTTG AAGAAGTGAA CGCGATTGCT ATGTCGATGC CAAACCTGCC AGATGAGTCT GCGCCTATCG GTGCTGATGA GACTGAAAAC GTCGAAATCC GTCGTTGGGG CACACCACGC AGCTTCGATT TCCCAGTTAA AGATCATATC GATTTAGGTG AAGGCCTAAA CGGTTTAGAT TTCAAAAGCG CAGTGAAAAT CACTGGTTCA CGTTTTATCG TCATGAAGGG CCAAATCGCC CGTTTAAACC GCGCATTAGG TCAGTTCATG TTAGATCTGC ACACTACTGA GCACGGTTAT ACCGAAGCTT ACGTACCATT ACTGGTTAAC GAAGCAAGTT TACTGGGTAC TGGCCAATTA CCGAAGTTTG GTGAAGACTT GTTCCACACT AAACCTGCGA CCGAAGAAGG CCAAGGCTTA AGCCTGATCC CAACCGCAGA AGTGCCATTA ACGAACCTAG TGCGTGACAG CATTGTCGAT GAAGATGAAT TGCCGATTAA GTTAACCGCG CATACCGCTT GTTTCCGCAG TGAAGCGGGC TCATACGGTA AAGATACCCG TGGTCTTATC CGTCAGCACC AATTCGATAA AGTGGAATTA GTGCAACTGG TTAAGCCCGA AGACTCAATG GCGGCGCTCG AAGCGCTAAC TGGCCACGCT GAAACCGTGC TGCAACGCCT AGGTCTGCCA TACCGCACAG TGATCCTGTG TACCGGTGAC ATGGGCTTTG GCTCAAGCAA AACCTACGAT ATCGAAGTGT GGTTACCAGG TCAAAACACT TACCGTGAGA TCTCTTCATG TTCAAACATG AAGGACTTCC AAGCACGTCG TATGCAAGCA CGTTACCGCG TTAAGGCAGA TAACAAGCCT GCATTGCTGC ACACCTTAAA CGGCTCAGGC CTCGCGGTAG GTCGTACTTT AGTTGCGATT TTAGAGAACT ATCAAAATGC CGATGGTAGC GTGACCATTC CTGAAGCACT GCGCCCATAC ATGGGTGGAC TGACTCAGAT CGGTTAA
|
Protein sequence | MLDPKFLRNE LAVTAERLAT RGFILDVAHL TQLEEKRKSL QVATEELQAS RNAISKSIGQ AKARGEDVDA IMAQVGDLGA QLDAKKVELA AVLEEVNAIA MSMPNLPDES APIGADETEN VEIRRWGTPR SFDFPVKDHI DLGEGLNGLD FKSAVKITGS RFIVMKGQIA RLNRALGQFM LDLHTTEHGY TEAYVPLLVN EASLLGTGQL PKFGEDLFHT KPATEEGQGL SLIPTAEVPL TNLVRDSIVD EDELPIKLTA HTACFRSEAG SYGKDTRGLI RQHQFDKVEL VQLVKPEDSM AALEALTGHA ETVLQRLGLP YRTVILCTGD MGFGSSKTYD IEVWLPGQNT YREISSCSNM KDFQARRMQA RYRVKADNKP ALLHTLNGSG LAVGRTLVAI LENYQNADGS VTIPEALRPY MGGLTQIG
|
| |