| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2039 |
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| Symbol | |
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| ID | 4476284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2448169 |
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| End bp | 2449548 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726624 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_869676 |
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| Protein GI | 117920484 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.017072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0193468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCATT CAGGCTTTCA GGCCAAACGC TTAATTCAAC TCGCACTCCC TGTGTTGATT
GCCCAAGTGA CCCAAACCAT GATGGGGTTT ATCGATACGG TCATGGCGGG CCGCGTCAGT
GCTGTCGATA TGGCCGCCGT GGCCGTAGGA ACCAGTCTTT GGTTACCCGC CATCTTATTT
GTCCAAGGGT TGCTGATGGC GTTTACGCCG TTATTTGCCC ATCATAATGG CGCAAATAAT
CAGAAAGCCA TTCAACCGCT GGCGTTTCAA GGCGCTTATC TGGCCTTAAT TGGTGGCCTT
GGCGTGATGG CGTTTCTTGC ATCCGCCCCA CTCGTGCTCA GCCATATGAA TTTAGAGCCC
CAATTGTACA ACTTAACCAT AGGATATATC GACGGTATTT TATGGGGCGC GCCCGCATTT
GTGCTCTATC AGGTATTACG CGGTTGCAGC GAAGGGATTT CTTACACATT ACCGACCATG
ATCATCGGAT TCGTTGGGCT CGCGGTGAAT ATTCCGGCGA ACTATATCTT TATCTATGGT
CATTTCGGCA TGCCAGCAAT GGGCGGCGCC GGCTGTGGTG TCGCGACAGC ACTAGTGTTT
TGGGCCATGT TGATTGCCAT GACGATTTAT ATGCAGCTAC ATAAAAAGTT TGCCGCATTG
GCGCCCTTTA GCCAGTTCCA TCGCCCTGAT TTTGCCACCA TGAAGAAGAT GACTAAGCTT
GGAATGCCGA TTGCGATGGC GCTCTTCTTT GAGGTGAGCC TATTTGCAAT TATTGCCCTG
CTGCTGGCGC CATTGGGCGC GACTGTCGTG GCCAGTCATC AGATTGCGCT GAACTTCTCC
GCCATAGTAT TTATGTTGCC ACTCTCGATT GGTATTGCCG TCTCGATTCG TATTGGCTAC
TACCTCGGCC GCGATCGCGC GGATATTTCT GCCGTGGTGG CAAAGGTTGG ATTGTGGTTG
GCGCTTTCAT TGGCCTTGTC GACGGCAATC TTAACGGTGT TATTCCGCTT CCAAATCGCT
GAGTTGTATA ACAGCGATCC TGAAGTGGTG GTACTTGCCG GCAGTTTGAT GCTCATGGCC
GCGCTGTATC AATTATCTGA CTCAATCCAA GTGGTCGCTG CCGGTGCCTT GCGTGGATAT
AAAGATACCC GCAGTGCGTT TTATATTACG CTGTTTTCCT ACTGGGGCAT TGGCATGACA
TTAGGTTATA CCTTGGCGTA TACCGACTTT ATCGTACCCG CCATGGGCGC CCATGGTTTT
TGGACTGGAT TAATTGCCGG CCTCACCTCA GCGGCGCTGC TGTTTTTCAT CCGCCTTCGT
TATATTCAAA AGCATGGTGT GCATTTAAGT TTGATTGAAG GCGACAGCGT GCATCATTAA
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| Protein sequence | MNHSGFQAKR LIQLALPVLI AQVTQTMMGF IDTVMAGRVS AVDMAAVAVG TSLWLPAILF
VQGLLMAFTP LFAHHNGANN QKAIQPLAFQ GAYLALIGGL GVMAFLASAP LVLSHMNLEP
QLYNLTIGYI DGILWGAPAF VLYQVLRGCS EGISYTLPTM IIGFVGLAVN IPANYIFIYG
HFGMPAMGGA GCGVATALVF WAMLIAMTIY MQLHKKFAAL APFSQFHRPD FATMKKMTKL
GMPIAMALFF EVSLFAIIAL LLAPLGATVV ASHQIALNFS AIVFMLPLSI GIAVSIRIGY
YLGRDRADIS AVVAKVGLWL ALSLALSTAI LTVLFRFQIA ELYNSDPEVV VLAGSLMLMA
ALYQLSDSIQ VVAAGALRGY KDTRSAFYIT LFSYWGIGMT LGYTLAYTDF IVPAMGAHGF
WTGLIAGLTS AALLFFIRLR YIQKHGVHLS LIEGDSVHH
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