| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1999 |
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| Symbol | |
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| ID | 4476363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2382945 |
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| End bp | 2384921 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639726581 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_869636 |
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| Protein GI | 117920444 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.171649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTATT CAATATCGCC GTCAGCTAAC GCTACGGATT ATGCATCTTT ATTACAGCAA
CAGTTTGGTT TTGATGGGTT CAGGCAAGGG CAACATGAGG TTGTCTCGCA GTTGTTGTCG
GGCCATTCGA GCCTTGCTAT TTTCCCCACC GGCTCAGGAA AATCACTCTG TTACCAATTT
ACTGCTCTGC AACTTCCCCA TCTAACCTTA GTGGTGTCAC CCTTACTGGC GTTGATCAAA
GATCAACTGA GTTTCCTGCA TGAGAAGGGC ATTAAAGCGG CAAGTATCGA CTCAACCTTA
ACGCCTGAAT TAACCCAACA GGTCATGCGT GATGCTCGTT ATGGCGAGTT AAAACTCCTG
ATGGTATCGG TTGAACGTTT TAAAAATGAG CGCTTTAGGC AATTTATTCA ATCAATTCCT
ATATCTATGT TGGTTGTTGA TGAAGCACAC TGTATCTCGG AATGGGGACA TAATTTTCGC
CCCGACTATT TAAAGCTTCC CGATTATCGC CGTGAATTAG CAATTCCATT GGTGCTGTTA
CTCACGGCGA CCGCGACACG CAAAGTGAAA CTGGATATGG CGGCGCGTTT CGATATCAAG
CCACAACATA TTGTTCAAAC AGGTTTTTAT CGTTCAAACC TCGACTTGAC CGTCTTGCCT
GTGGCAAGCC AACATAAACT GACAGCACTG CAACAACAAC TTAATCTCTT TACTGGTACG
GGGATTGTGT ATGTGACTTT GCAGCATACT GCGGAGGATG TTGCCGCGAA ACTTTGCCAA
ATGGGCTTTG ATGCGAGTGC CTATCATGCG GGGTTTGAGG ATGAAAAACG TCAGCAAATT
CAGCAGGATT TTATGCAAGG TAAGATCCGC ATCGTGGTTG CGACTATCGC CTTTGGTATG
GGCATAGACA AAAGCAATAT TCGCTTTGTG GTTCACTACG ATCTGCCTAA ATCCATTGAG
AATTATTGCC AAGAAATTGG CCGTGCAGGA AGGGATGGCC TGTTGTCACA TTGTGTGACC
TTGGCGAATT TAGATGGCAT AAACACGGTC GAAAATTTTG TTTACGGTGA TACGCCGGAA
CTGGCCAGTA TTGCAGCCGT TATCGATAAC ATTCGCGAAG AAACCCATAA CGGACGTTGG
GAGTTGCAAC TTCATCAGCT ATCAAATGTG AGTAATATCA GGCAGCTCCC ACTTAAAACC
TTGCTAGTTC AGCTTGAAAT GATGGGCGTG ATTAAGCCGC TTTATGCTTA TTACGCCGAT
ATCAGTTACC GTTTTATTGA GCCACAGGCG CAGATCTTGA GCCAGTTTTC CCCCGAGCGT
CAGGCATTTT TAAATGACAT CTTTACCCAT ACTCAGATGA AACGAGTATG GGGCAGTTTA
GATTTTTCCG CGCTCTACCA AGCCACAGGT GCGGAACGTA CTCGAGTATT AGCGGCATTA
GAATATCTTG CCAGTCAACA GCTTATCGAA TTGGAAGCTA AGCGAGTAAC GGATGTCTAT
CAAGTGAATG CTGAGGTGTT AGCACAGGGG CATTTAGCCG ATGAGCTCCA TCAATACTTT
ACCGACAAAG AAGCGAAAGA AGTCGCCCGT ATTGCCCAGT TAGTGCGATT TTTTGAGCTA
ACAACTTGCT TAAATTACAA TTTGGCCCGC TATTTTGATG ATAATGCCGC GCCTCAATCC
TGTGGTCATT GCAGTGTATG CCGCGGCCAA TTGGCTAAAT TGGCGTATTC CGAAGTGCCA
AAGTGGCCTG ATGATGCGCA GCTTAAGGCC GATTTGCATG AACTGAAGCG TACGGCGGGG
TCGAAAGGTT TAGCTTCATT ATCCTTAGAT ACTCAATGCC GTTTTATGGC CGGCATGACA
TTACCGCTGT TTACTCGCTT ACAAGTACGG AAATTATCAG GTTTTGGTCG CTGCGAACAC
CTCAGATATG CAGAAATTAA AGCTAAATTA GCGCAGTTAG CTGACGCAGC TTGCTGA
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| Protein sequence | MSYSISPSAN ATDYASLLQQ QFGFDGFRQG QHEVVSQLLS GHSSLAIFPT GSGKSLCYQF
TALQLPHLTL VVSPLLALIK DQLSFLHEKG IKAASIDSTL TPELTQQVMR DARYGELKLL
MVSVERFKNE RFRQFIQSIP ISMLVVDEAH CISEWGHNFR PDYLKLPDYR RELAIPLVLL
LTATATRKVK LDMAARFDIK PQHIVQTGFY RSNLDLTVLP VASQHKLTAL QQQLNLFTGT
GIVYVTLQHT AEDVAAKLCQ MGFDASAYHA GFEDEKRQQI QQDFMQGKIR IVVATIAFGM
GIDKSNIRFV VHYDLPKSIE NYCQEIGRAG RDGLLSHCVT LANLDGINTV ENFVYGDTPE
LASIAAVIDN IREETHNGRW ELQLHQLSNV SNIRQLPLKT LLVQLEMMGV IKPLYAYYAD
ISYRFIEPQA QILSQFSPER QAFLNDIFTH TQMKRVWGSL DFSALYQATG AERTRVLAAL
EYLASQQLIE LEAKRVTDVY QVNAEVLAQG HLADELHQYF TDKEAKEVAR IAQLVRFFEL
TTCLNYNLAR YFDDNAAPQS CGHCSVCRGQ LAKLAYSEVP KWPDDAQLKA DLHELKRTAG
SKGLASLSLD TQCRFMAGMT LPLFTRLQVR KLSGFGRCEH LRYAEIKAKL AQLADAAC
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