| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1958 |
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| Symbol | |
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| ID | 4479755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2330327 |
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| End bp | 2332888 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639726540 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_869595 |
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| Protein GI | 117920403 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0202201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.592447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAA GAACCAAAGT TGCGTCGGCT ATTAATTTAG CTGTCGTTAG CTCAATTGCT
GCTGGTACCT TTGTAGCATC AAGCGCATTT GCAGCTGAAG AGACTGCAAA AGTAGAACGT
ATTGAAGTCA CGGGTTCACG TATTCAACGT CAAGATATGG AAACAGCTTC TCCTGTTACC
GTTATTGATG CTGCTGCAAT TAAAGCCGAA GGCTTTACCT CTGTAGACCA AATGTTGCAA
GTTCAAACCT CTATGGCGGG TGCTGCGGTT GGTTCAACCA CCAACAACGG TGCGGACGGT
GTTGCACAAG TTGACTTACG TGGTATGGGC TCGCAACGTA CTCTCGTATT GCTGAACGGT
CGTCGTATGG TGAACTCAGG TTCAGGTGCT GACAGTGCTG TGGATTTAAA CTCTATCCCA
GTTGCTATGA TCGCTCGCGT TGAAATCCTG AAAGACGGCG CTTCAGCGGT ATACGGTTCT
GATGCGATTG CCGGTGTAGT TAACATCATC ACTAAGAAAG ATTTCGATGG TTTCCAATTA
GACTTTAACG GCAGCGGTAC CGACAAAGGT GACGGCGAAA ACGGTGACAT CAGCGCATTG
TACGGCTTCA ATACTGAAGG CGGTAACTAT ACCTTTGGTG CGGCTTACTC AGATCGTCGT
GGTGTAGTTC AAGGTGACCG TGATTGGTAT GATCCACTGG ACAATACCAG TTCTATCATC
CCAACGGGTG CTTTAAATCA AAAAGTTATC GATGCCAACG GTAATTGGGT TAAAAGAACT
TCGACTTATG ACTACTCAAA TGATGTCTAT TTCCAAACAC CAAGTGAGCG CCGTAGCTTA
TTTGCAAATA TGACGCAAGA GCTAGGCAAT GATGTTGTTC TGACTGCGGA TGCTATTTAT
ACCAATCGCC GTTCTAACCA ACAGCTTGCA GCACAGCCAG CTCAAATCAA ATTGAATGTG
TGTGGTGATC CAAGAGTTAC CGATCCTACA GCAGGATGTC TGACCCTTGA CCAAGGCATG
ATTGATGCTG GTATTGAAGC TGATGCCCGT GGACAAGTGC AATACAATAG ACGTATGAAG
GATGTTGGCC CGCGTATTTA TAACCAAGAT ACTGATACTT GGCGTTTATC AGCTGGTTTA
GCAGGTTCTT TAGACGTTCA TACGGGTATG AATTGGAATG TGGATTACAC ATTTGGTAAG
AACGAAGCTA AGACAGGTGT TGCTAACTCT ATTAACGCAA CATTGATGGC TAATTCAATC
TATGCCGACC CATATGCTTG GTTTGAAGGT TCTCCTTTGA CTGATGAGAT GAAGGATGTT
TCTTATGATC AGCAAGAGAC GGGTGGTAAT GAGCAGCAAA CATTATCTGC AGGCTTAAAC
GGTGAATTAT TCGATCTGAG TGCTGGAGCC GTGGGTTTCG CTATTGGTGC TGAATACCGT
CGTGAAAGTG GTTTCTACAA TCCAGATGCA ATTGTTGTTG CAGGTGACAG TACTGCCGCT
CAACAAGATC CTACAAGTGG CAACTACAAC GTTATTTCTA TCTTCCAAGA AGTGAGCGTG
CCATTTACGG AAAAACTAAC GGGTGAATTT GCACTACGCT TAGACGATTA CTCTACTTTC
GGTAAAGCGA CTACTTGGAA AATTGGTTTA ACCTACACTG CAACAGATGA GCTGATGGTT
CGCACTGTAG CTGCTACCGG TTTCCGTGCT CCTAGCGTTG CTGAGCTATA TGGCGGTAAC
TCAGGTTCAT TTGATTATTT AACTAATCCT TGGTTACCTA TGAGTGATCA AACTGGACAG
ATTTTAGTTA ACCGTACATC TGATCCAGAT TTGAAACCTG AAGAGTCAGA ATCTTACACT
GCAGGCTTAG TATATTCGCC AAGCTATATT GATGGCATGT CAATTACCCT TGACTACTGG
CGCTTCAAAG TCACTGATGC AATTGCTCGT GCAGACGTGC AAGTTGGTTT AGACGCGTGT
CATGGTGGTG ATACAGAAGC TTGTAGCACA TTCAATATCA CAGCTGATGG TGACTTATTC
AACTTAACAA GTGCACTGAC TAACGTAGGC TCACAGGACA CCAGCGGTGT TGACTTCAAC
TTAGCTTATA ACTTTGAGCT ACTTGGTTTA GATTGGAAAG TGAGTAACGA TACTACTTAC
TTGATTAAGT TCGAACAGGA TGGTGAAAAC TATACTGGCA CAATCGATGG TAATACGGGA
GCTTATGCCC GCGTACGTAA CAACTTCAGC ATCTCTGCAG GTCAAGATGA TTGGAGCGTG
ATGTACTTCA ACCGTTATAT CAGATCAATG GATGATGTTT ACACTGACTA TGATGCGAAC
GATAACCCAT TCGTTGCAGT AAGAGGTGTA GATTCAATTC TGTATCACAA CATTTCTGGT
ACTTACCATG TAAATGACAG CACAACTGTT AGTTTAGGTG TGAAGAACTT TACTGATGAG
AAACCTCTTT ACGTAACTAA CGGCAGTGAT GCTGGTACTG TTCCAGAAGT TTACGACACT
ATCGGCCGTA CTATTTACGG TGGTGTAACA GTTAAGTTCT AA
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| Protein sequence | MIKRTKVASA INLAVVSSIA AGTFVASSAF AAEETAKVER IEVTGSRIQR QDMETASPVT
VIDAAAIKAE GFTSVDQMLQ VQTSMAGAAV GSTTNNGADG VAQVDLRGMG SQRTLVLLNG
RRMVNSGSGA DSAVDLNSIP VAMIARVEIL KDGASAVYGS DAIAGVVNII TKKDFDGFQL
DFNGSGTDKG DGENGDISAL YGFNTEGGNY TFGAAYSDRR GVVQGDRDWY DPLDNTSSII
PTGALNQKVI DANGNWVKRT STYDYSNDVY FQTPSERRSL FANMTQELGN DVVLTADAIY
TNRRSNQQLA AQPAQIKLNV CGDPRVTDPT AGCLTLDQGM IDAGIEADAR GQVQYNRRMK
DVGPRIYNQD TDTWRLSAGL AGSLDVHTGM NWNVDYTFGK NEAKTGVANS INATLMANSI
YADPYAWFEG SPLTDEMKDV SYDQQETGGN EQQTLSAGLN GELFDLSAGA VGFAIGAEYR
RESGFYNPDA IVVAGDSTAA QQDPTSGNYN VISIFQEVSV PFTEKLTGEF ALRLDDYSTF
GKATTWKIGL TYTATDELMV RTVAATGFRA PSVAELYGGN SGSFDYLTNP WLPMSDQTGQ
ILVNRTSDPD LKPEESESYT AGLVYSPSYI DGMSITLDYW RFKVTDAIAR ADVQVGLDAC
HGGDTEACST FNITADGDLF NLTSALTNVG SQDTSGVDFN LAYNFELLGL DWKVSNDTTY
LIKFEQDGEN YTGTIDGNTG AYARVRNNFS ISAGQDDWSV MYFNRYIRSM DDVYTDYDAN
DNPFVAVRGV DSILYHNISG TYHVNDSTTV SLGVKNFTDE KPLYVTNGSD AGTVPEVYDT
IGRTIYGGVT VKF
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