| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1957 |
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| Symbol | ruvB |
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| ID | 4479754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2328348 |
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| End bp | 2329352 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726539 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_869594 |
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| Protein GI | 117920402 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0904224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.777155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGAAG CAGATAGACT GATCCAGCCG CAGCTGCAAG GTCAAGACGA TGTTATCGAC
AGGGCCATGC GCCCTAAATT GCTCGATGAA TATACTGGGC AGGATGATAC GCGTGCCCAA
TTAAAAGTGT TTATTCAAGC GGCAAAGAAT CGCGAAGAAG CCTTAGACCA TATGCTGATC
TACGGCCCGC CGGGGTTAGG TAAAACCACC TTAGCCATGA TCGTGGCTAA TGAAATGGGG
GTGAACATCA AATCGACGTC GGGGCCTGTG CTCGAGAAAG CCGGGGACTT GGCGGCGCTG
CTCACCAATC TTGAGGCGGG GGATGTGCTT TTTATCGATG AAATTCACCG CTTAAGTCCT
GTCGTCGAAG AAATTCTGTA TCCTGCTATG GAAGACTATC AGCTGGATAT TATGATTGGT
GAGGGGCCTG CTGCACGCTC AATTAAGTTG GACCTACCGC CTTTTACCTT AGTGGGGGCG
ACCACGCGGG CAGGGGCGTT AACCTCTCCG CTAAGGGCGC GTTTTGGCAT TCCACTGCGG
CTCGAGTTTT ATAATGTCAA AGATTTAAGC ACTATTGTGA CCCGTTCGGC ACAGGTGATG
GGATTGGCCA TTGATAGTGA AGGGGCCACC GAAATTGCCA AACGCTCACG GGGAACACCG
AGGATCGCCA ACCGTTTACT GCGTCGAGTG CGTGACTATG CGGAAGTGAA ACACGACGGT
GCTGTAACGC AAAAAGTTGC GGAGCAGGCG CTTGATTTAC TCGATGTCGA TGGCGAAGGT
TTCGATTATA TGGATCGAAA ACTGCTGCTT GCTATTATCG ATAAGTTTAT GGGAGGCCCT
GTAGGGCTTG ATAACCTTGC CGCGGCTATT GGTGAGGAGC GTGAAACCAT TGAAGATGTA
TTGGAGCCTT TCCTTATCCA ACAAGGCTTT ATCCAACGTA CTCCACGTGG TCGTATTGCC
ACAACCCGAG CCTATCTGCA TTTTGGCATG ATAAAACCAG AGTAA
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| Protein sequence | MIEADRLIQP QLQGQDDVID RAMRPKLLDE YTGQDDTRAQ LKVFIQAAKN REEALDHMLI
YGPPGLGKTT LAMIVANEMG VNIKSTSGPV LEKAGDLAAL LTNLEAGDVL FIDEIHRLSP
VVEEILYPAM EDYQLDIMIG EGPAARSIKL DLPPFTLVGA TTRAGALTSP LRARFGIPLR
LEFYNVKDLS TIVTRSAQVM GLAIDSEGAT EIAKRSRGTP RIANRLLRRV RDYAEVKHDG
AVTQKVAEQA LDLLDVDGEG FDYMDRKLLL AIIDKFMGGP VGLDNLAAAI GEERETIEDV
LEPFLIQQGF IQRTPRGRIA TTRAYLHFGM IKPE
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