| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1956 |
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| Symbol | ruvA |
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| ID | 4479753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2327610 |
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| End bp | 2328227 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726538 |
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| Product | Holliday junction DNA helicase RuvA |
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| Protein accession | YP_869593 |
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| Protein GI | 117920401 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
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| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00381182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.897117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAGGTC GTTTACGTGG CGTGTTAATT GAAAAGCAAG CGCCAGAGGT GTTGATTGAT
GTCAATGGCG TGGGGTACGA GTTACAGATG CCCCTCACCA GCTTCTATGA ACTCCCCGAG
GTCAATCAAC CGACCACAGT GTATACCCAT TTTGTGGTGC GTGAAGATGC CCAGCTGCTT
TACGGCTTTA TCACTAAACA AGAGCGTTCA CTGTTTCGCT TGCTTATCAA GGCCAACGGT
GTGGGTCCTA AACTGGCGTT AACCATTCTT TCTGGCATGA CCGCCAGCGA GTTTGTGGGC
TGTGTCGAGC GTGATGATAT AGTGACGCTG GTGAAATTAC CCGGTGTCGG TAAAAAGACT
GCCGAACGTT TATTGGTTGA GATGCGCGAT AAATTGAAGA GCTTGATGGA GGCATCCGTA
GGCTCTGAGC GTGAGTTCGT GCTGCAATCT AACTATTCAC CGGCTCCGAC GGTCAACAGT
GCCGAAGAGG ATGCGATTTC AGCCTTGATC TCCCTCGGCT ATAAACCACC ACAGGCGAGT
AAAGCCGTTT CTGCCGCCTA TAAAGAAGGC ATGGACAGTG AGACCTTGAT TAAGGCCGCG
TTAAAATCGA TGCTCTAA
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| Protein sequence | MIGRLRGVLI EKQAPEVLID VNGVGYELQM PLTSFYELPE VNQPTTVYTH FVVREDAQLL
YGFITKQERS LFRLLIKANG VGPKLALTIL SGMTASEFVG CVERDDIVTL VKLPGVGKKT
AERLLVEMRD KLKSLMEASV GSEREFVLQS NYSPAPTVNS AEEDAISALI SLGYKPPQAS
KAVSAAYKEG MDSETLIKAA LKSML
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