Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1954 |
Symbol | |
ID | 4479751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2326104 |
End bp | 2326850 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639726536 |
Product | hypothetical protein |
Protein accession | YP_869591 |
Protein GI | 117920399 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.04417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGTC ATAGTAAGTG GGCCAACATT AAACACCGCA AAGCAGCGCA AGATGCCAAA CGCGGTAAAC TCTTTACCAA ATTTATCCGC GAGTTAACGG TTTCAGCCCG TGAAGGTGGC TCGGATCCCG ATTCAAACCC GCGTCTGCGT ATCGCTATCG ATAAAGCGCT TGGCGGCAAC ATGACCCGCG ACACCATTGA GCGCGCAATT AAACGTGGCG CCGGTGAGCT TGAAGGTCAG CAACTCGAAA CCATTATTTA CGAAGGCTAT GGCCCTGGCG GCACCGCTGT GATGGTCGAG ACCATGACAG ATAACCGTAA CCGTACCGTG AGCGGCGTGC GTAATGCCTT TAGTAAATCG GGTGGGAATT TAGGGACCGA TGGTTCGGTT GCCTATTTGT TCACTAAGCG CGGCGTGTTG TCCTATGCGC CGGGTACTGA TGAAGACGCC CTGATGGACG CGGCGCTAGA AGCGGGCGCC GAAGATGTGG TGAGTTACGA TGATGGTGCA ATTGACGTAT TTACCGAACC GACCGAGTTT TATGGGGTGA AAGATGCCCT CGATGCGGCG GGATTTGTCA GTGATAACGC CGAAATCGCG ATGATAGCCT CGACCAAAGC GGAGTTAGAT GCCGAGACGG CGGAGAAGTT TATGCGTCTT ATCGATACCC TCGAAGAGCA CGATGATGTG CAAGAGGTGT ATCATAATGC CGAAATCTCC GATGAGATTA TGGAAAGTTT AGGGTAA
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Protein sequence | MAGHSKWANI KHRKAAQDAK RGKLFTKFIR ELTVSAREGG SDPDSNPRLR IAIDKALGGN MTRDTIERAI KRGAGELEGQ QLETIIYEGY GPGGTAVMVE TMTDNRNRTV SGVRNAFSKS GGNLGTDGSV AYLFTKRGVL SYAPGTDEDA LMDAALEAGA EDVVSYDDGA IDVFTEPTEF YGVKDALDAA GFVSDNAEIA MIASTKAELD AETAEKFMRL IDTLEEHDDV QEVYHNAEIS DEIMESLG
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