| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1918 |
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| Symbol | |
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| ID | 4478226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2279346 |
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| End bp | 2280815 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639726500 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_869555 |
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| Protein GI | 117920363 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.812724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAC ATCTATTAAT GGCCTTTACG GCAATGAGCT TGCTTGGCGG ATGCAGTATG
TCCCCTGATT ACACACCGCC AAAGGTGAAA GTCAGTGAGC TGTATTTAAA TGCGGCGACT
GAGGGCGTGA GCCAAGAGGC CTTGGCTTAC CAAGCTTGGT GGCGTCAGTT TAACGATCCT
CAGCTCAATG CGCTGGTGGC AAAGGCGCAG CAGCAAAATA TAAGTCTGCA GATCGCCAGT
GAGCGTGTGC GCGCCGCACG GGCCTATCAG GCGGCGGTGT CATCGTTAAA AGTGCCGACC
GTTTCGGTGG GCGCGGGGTA CCTCGATATG CGCATCAGTG AAAACGATCC GCTGATGGGC
AGTGCGGTTG GAGGCATAGA ACTACCCGCT GGCTTGGGTG GCGGCAACCT TAAGTTGATG
AATCGTGACC CGAACAGTAC AACCGTGGGC GCGAGCATTG CTTGGGAGGC GGATTTGTTT
GGCCGAATAG CGAGTTTAAC TCAGGCCGCA GAAATCCGCG CCGAGCAGGC GCAATTGTAC
CGCGCTAATC TGACCACCCT AATAACGGCG GAGGTTATCG ATAACTATCT GCAATACCGT
GGTACGCAGG AGCGGATGGC GATTGCAAGG CAAAACATTG CCGAACAAGC CGAAGTCTTG
GCCTTGGTGG AATCCTTGGA GCGCAATGGT TATGGCTCGC CGCTGGATGT CGCTAATGCC
AAGGCGGCGC TTGCCGCCAG CGAGGCCATG TTACCCATGT TAAGTTCGGC CGAGCAGGCG
CATTTGCATC GACTGGCGAT TTTGCTCGGG GAAAGCCTCA AGGAGACGTC AGGACGGTTA
AGCGCCGCGG CGTTACCCGC AATGACGGAG TTAATCCCAA CGGGCGTACC TTCAGAGTTA
CTGACACGCC GTTTAGATAT TGCCATTGCC GAGCGTGAAA TGGCCGCTAA AAACCAAGAG
CTTGGGGCGG CGATTGCGGC TAAGTATCCG AGCTTTTTCT TAACGGGGGC ACCGGGATTA
TCGGCCGATC ATATTGACGA TCTCTTCTCA TCGGATTCGC TTACTTGGGC TTTAGGCGCG
GGCGTGAGCT GGAATGTCTT CGATGGTGGC CGCACTCAAG CCATGGTGGA AATACAGGAA
GCGGGTTTTA AAACTGCGGC GCTTAGCTAC CAGCAGACGG TGAATAACGC CATCAATGAA
GTCGAAACCG TGCTAAAGCA TTATGGCAAT AATCAGCAAT ATCATCGCTT TATTGCAAAG
GCAGAGGCGC AATCTGAGGT TGCGGTACAA AAAGCGACTT CGCTGTATCG CGCCGGTTTA
GAAAATCACT TGAGCGTGTT AACTGCGCAG AATGTGAAAA ACAATATGCA GGATGCGGAA
GTGTTAGCCC GCCTACAAAC GGCATCGAGT GTGGTGTCGC TTTATAAGGC ATTGGGCGGC
GACTGGACTC TGGCAAACAC CGCGGATTAA
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| Protein sequence | MNKHLLMAFT AMSLLGGCSM SPDYTPPKVK VSELYLNAAT EGVSQEALAY QAWWRQFNDP
QLNALVAKAQ QQNISLQIAS ERVRAARAYQ AAVSSLKVPT VSVGAGYLDM RISENDPLMG
SAVGGIELPA GLGGGNLKLM NRDPNSTTVG ASIAWEADLF GRIASLTQAA EIRAEQAQLY
RANLTTLITA EVIDNYLQYR GTQERMAIAR QNIAEQAEVL ALVESLERNG YGSPLDVANA
KAALAASEAM LPMLSSAEQA HLHRLAILLG ESLKETSGRL SAAALPAMTE LIPTGVPSEL
LTRRLDIAIA EREMAAKNQE LGAAIAAKYP SFFLTGAPGL SADHIDDLFS SDSLTWALGA
GVSWNVFDGG RTQAMVEIQE AGFKTAALSY QQTVNNAINE VETVLKHYGN NQQYHRFIAK
AEAQSEVAVQ KATSLYRAGL ENHLSVLTAQ NVKNNMQDAE VLARLQTASS VVSLYKALGG
DWTLANTAD
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