| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1912 |
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| Symbol | |
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| ID | 4478220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2268700 |
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| End bp | 2269845 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639726494 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_869549 |
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| Protein GI | 117920357 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000271061 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCACG CTTCGAACAC CCACCCAGTT ACCGAACTGA CTAAAGAATT AATCGCCCGT
CCTTCGGTCA CCCCGCTGGA TGAAGGCTGC CAAACCCTGA TGGCCGAACG TCTCGCCGCC
ATTGGCTTTA ATATTGAGCC CATGGTCTTT GAAGACACCA CCAATATGTG GGCGCGTCGC
GGTAATGAAG GCCCAGTATT TTGTTTTGCC GGCCATACCG ATGTAGTGCC CGCAGGCGAT
TTAAGCCGCT GGCATACCCC GCCTTTTGAG CCAACCATTA TCGACGGTTA CCTCTATGGG
CGCGGCGCAG CCGACATGAA AGGCTCACTG GCGGCGATGA TCGTCGCGAC CGAGCGTTTT
GTGGCTAAGC ACCCAAATCA TCCCGGCTCG ATTGCGTTTT TGATCACTAG CGATGAAGAA
GGCCCCTTTA TCAATGGCAC CACACGGGTT ATCGACACCC TAGAAGCCCG TAATGAAAAA
ATCACTTGGA CGCTGGTGGG CGAACCCTCA TCGACCCTAA AACTCGGTGA TGTGGTCAAA
AATGGGCGCC GTGGCAGCCT GACCGCCAAC TTAACCGTTA AGGGCATTCA GGGCCATGTG
GCCTATCCGC ACCTTGCGGA TAACCCAATC CACAAAGCCG CGCCGTTTTT AGCCGAGTTA
AGCCAAACCC ATTGGGATAA TGGCAACGAA TTCTTCCCGC CCACCAGCAT GCAAATCGCC
AATATTAATG GCGGTACGGG CGCATCGAAC GTGATCCCAG GCACCCTAGA GGTGATGTTT
AACTTCCGTT ATTCGACCGA AGTGACCGCC GAGATATTAA TCGAGCGCGT GGAAGCCTTA
TTAACCGCCC ACGAACTGGA TTATGACATC AGCTGGACCT TCAACGGTCT GCCATTTTTA
ACCGGCGAAG GCCCACTGTT AGACGCGACT CGCCATGCTA TACGTCAGAT CACTGGCTAT
GATACCGATC CGCAAACCAC GGGCGGCACC TCTGATGGAC GCTTTATTGC ACCAACGGGC
GCCAAAGTGT TGGAACTCGG TCCAGTGAAC GCCACTATCC ATAAAGTGAA CGAGTGCGTG
AAAATCGACG ATCTCGAGCA GTTAGCCCTG TGCTACGAAG TGATTTTGGA ACAGTTACTG
TGTTAA
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| Protein sequence | MTHASNTHPV TELTKELIAR PSVTPLDEGC QTLMAERLAA IGFNIEPMVF EDTTNMWARR
GNEGPVFCFA GHTDVVPAGD LSRWHTPPFE PTIIDGYLYG RGAADMKGSL AAMIVATERF
VAKHPNHPGS IAFLITSDEE GPFINGTTRV IDTLEARNEK ITWTLVGEPS STLKLGDVVK
NGRRGSLTAN LTVKGIQGHV AYPHLADNPI HKAAPFLAEL SQTHWDNGNE FFPPTSMQIA
NINGGTGASN VIPGTLEVMF NFRYSTEVTA EILIERVEAL LTAHELDYDI SWTFNGLPFL
TGEGPLLDAT RHAIRQITGY DTDPQTTGGT SDGRFIAPTG AKVLELGPVN ATIHKVNECV
KIDDLEQLAL CYEVILEQLL C
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