| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1871 |
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| Symbol | |
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| ID | 4477930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2214932 |
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| End bp | 2215693 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726453 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_869508 |
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| Protein GI | 117920316 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTAAAG ACTGCGGCTG CTCCTTACCC CGCCATTCAC ATGAACACGG CCATCTGCAT
CACCATCAGG AATTGCACAC CAATCCTCAG CTTAACGATA AAAAAACCTT GTCGGTGATC
CACAAAATTC TCGATAAAAA CGATGTCGAA GCGGCCCATA ACCGTGCGCA TTTTGAGGCG
CACAATATCA CTGCCTTCAA TTTAATGAGT AGCCCAGGCA GTGGCAAAAC CACCTTGCTC
GAACACTTAA AAGAGTACAC CACCCTCAAC TACGCCGTAA TTGAAGGGGA TTTAGAGACC
TCCCGCGATG CCGACCGCTT AATCGCCAAA GGCATTCAGG CCCATCAAAT TCAAACGGGC
AGTGCCTGCC ACCTCGACGC ATTCATGGTG CATGGCGCTT TGCATCACTT GCCACTCGAA
GGCTTAGATA TTTGCTTTGT CGAAAACGTG GGAAACCTCG TCTGCCCCGC CAGTTATGAT
GTCGGCACCC ATAAAAATAT CGTGCTGCTC TCGGTTCCCG AAGGCGATGA TAAGATTGAG
AAATATCCAG TGATGTTCCG CCGTGCCGAT CTGGTGCTCA TCACCAAATG TGACCTCTTG
CCCTACTTCG ATTTCAGTGT TGACGAGGCG AAAGCTCAAC TTAAAAAGCT CAACCCCAAC
ACACAAATTC TGGAAGTCTC CATTAAGGAT GGCGATGCCA TGCGTGCCGT CGTTGCATGG
CTGAACGATA ACCTTCACCA CGCTGCGGGA GAGCCACAAT AA
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| Protein sequence | MCKDCGCSLP RHSHEHGHLH HHQELHTNPQ LNDKKTLSVI HKILDKNDVE AAHNRAHFEA
HNITAFNLMS SPGSGKTTLL EHLKEYTTLN YAVIEGDLET SRDADRLIAK GIQAHQIQTG
SACHLDAFMV HGALHHLPLE GLDICFVENV GNLVCPASYD VGTHKNIVLL SVPEGDDKIE
KYPVMFRRAD LVLITKCDLL PYFDFSVDEA KAQLKKLNPN TQILEVSIKD GDAMRAVVAW
LNDNLHHAAG EPQ
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