Gene Shewana3_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1827 
Symbol 
ID4477887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2164599 
End bp2165444 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content47% 
IMG OID639726411 
Producthypothetical protein 
Protein accessionYP_869466 
Protein GI117920274 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.847911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.09571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTC ATCAACTTAG CCAGATAACA TCTGTGATCA TTTTTTGGGT ACAAGACCAC 
CTTGCCGCTT GGGCGCTCAG CGCTAATCAA GTTCCAGTTG AACTCCCTAT CGAGGAGGAA
AAGCAATGGT TAGCTTGTTC TAATGGGGAA CGGCTTTCCC AAGCACTTGC CGATATAGAT
TTACGTCTTG GGGGAAATTA TCCTTTGCAA CTAATTTACG ATACTAAGAG TCAGTCAACC
CTAGAGGCAG CGCTGCCTAA GTTGCTAGTT CAATTGTCTA AGCGTGGTTG GCAGATTCTG
TCCTATGAGC ACTTAGCCAA ACGTTGTGCT TTGACTATTA ATGCCGAGCT ACCCAAAAGA
AGCTTGGTCG CTGAGTTGCT CCTCCCCATG TTGCTTGCTA CAGATAACAC CACTGAGCGC
CAGAGGTTAC AGGCGGCGAC TCATCGCGAG CATGAAGCAC TCACACAGCA ACTACAGTGG
GATAGAGAAC AAATCATGAA GGAGAATGAA CGGTTAGTGG CTCAAAATGC CATACTACGT
CGTGTAGATA CAGAGCAGTT GATGAGTTAC TTGCCCGCAT TATTTCCTCG GGTATTTACC
GTTATCGACG GGAATGAGCT GGCTTTATTA GCAGGACGGA TAGAGCCCTT TAAAATCGCA
AACCCTTACC CTGAACCGAG TCAAGAAACT CTCTACCAAT TGCAGCGACA ATTTAAAGCC
CTACCAATAG ACATTCAGCG CCAAATTGTC GGTTTTGTTT CAAGATTACC GCAGCGGCAG
CAATTAACGC CGCGTCCTGA AATACGTAGC CTGATAGAGC AACTAGAGGC GGATAAACAT
GCCTGA
 
Protein sequence
MTTHQLSQIT SVIIFWVQDH LAAWALSANQ VPVELPIEEE KQWLACSNGE RLSQALADID 
LRLGGNYPLQ LIYDTKSQST LEAALPKLLV QLSKRGWQIL SYEHLAKRCA LTINAELPKR
SLVAELLLPM LLATDNTTER QRLQAATHRE HEALTQQLQW DREQIMKENE RLVAQNAILR
RVDTEQLMSY LPALFPRVFT VIDGNELALL AGRIEPFKIA NPYPEPSQET LYQLQRQFKA
LPIDIQRQIV GFVSRLPQRQ QLTPRPEIRS LIEQLEADKH A