Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1778 |
Symbol | |
ID | 4478665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2092479 |
End bp | 2094530 |
Gene Length | 2052 bp |
Protein Length | 683 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639726361 |
Product | carboxy-terminal protease |
Protein accession | YP_869417 |
Protein GI | 117920225 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0159186 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAAAC TCACTTTGGC TACATCCATT GCCACTGTTT TTGTCGGATT CTCGGCTTGG GCTGTACCAC CCACGATTCA AATCAGCGAG TTACCCACTC TCAAGCAGGA AGCGCAGCAT AAAGTGGCGA GTAAGCGAGT GACGGATTTA TACACTCGTT CCCACTATCA CAGATTCGCC TTAGACGATG CGTTTTCGGC GCAGATCTTC GACCGTTACC TGCAACAACT CGATTACCGT CGTAATGTGC TGACGCAAGC CGATGTCGAC AGTTTTAAGC CTTATACCAA TCAATTCGAT GATATGTTGA GTTCGGGCGA TCTTGATCCT GCCTACAAGA TGTTTGATTT GGTGCAAAAG CGCCGCTACG AAGGCTTTGT GTACGCGCTT TCTCTGCTCG ATAAAGAGAT GGATTTCACC GTGCCAGGTG ATGCCTACGA GTACGACAGA GAAGATGCGG CTTGGCCGAA AGATCAAGCC GAGATCAACG AGTTGTGGCG CCAACGTGTT AAATACGATG CGTTGAATCT GAAACTCACA GGCAAGAAAT GGCCTGAGAT CGTCGATATT CTGCAAAAGC GTTATAACAA CGCCATCAAA CGTCTGACCC AGACCAATAG CGAAGATGTG TTCCAAGCGG TGATGAATGC ATTTTCTCGC AGCATCGAGC CACACACTAG CTATTTATCG CCCCGTAATG CTGAGCGTTT CCAAATGGAA ATGAACTTAA GCCTCGAAGG TATTGGTGCG CAGTTACAGC TCGAAGACGA TTACACTGTC ATCAAGAGTT TGATTGCAGG TGGTCCTGCG GCCAGCAGTG AAAAACTGTC GCCGGAAGAT AAGATTGTCG GTGTCGGCCA AGAAGGCGGT GAGATTGTTG ATGTGATCGG CTGGCGATTA GACGATGTGG TCGATCTGAT TAAAGGCCCT AAGGGCAGTA AAGTTATATT ACAGATTTTA CCTAAGAAGG GCGGTTCTAA CGCTAAGCCG TTCAATCTGA CCTTAGTGCG CGACAAAATC CGTCTAGAAG ACCGTGCCGC GACCTCAAAG ATCATCGAGC CAAAAGACGG TGAATACGCC AACCGTAAAG TGGGTGTGAT TCAAATTCCT GGTTTCTATA TGAATTTATC CCAGGATGTC GAAAAAGAAT TGGTGAAGTT AAACGAAGCC AAGGTTGAAG GTGTCGTTAT CGACTTACGT GGTAATGGCG GCGGTGCGTT AACCGAAGCC GTATTACTGA CCGGACTCTT TATCGATATG GGCCCTGTAG TGCAAGTGCG TGACGCCGAT GGTCGAGTGT CTGCCCACCG TGATAACGAT GGCAAGACGA CGTATGCTGG TCCGTTAACC ATTATGGTTG ACCGTTACAG TGCATCAGCC TCTGAGATTT TTGCCGCTGC CTTGCAAGAT TATGACCGTG CGCTGATTGT CGGTGAGTCT AGCTTTGGTA AAGGCACTGT GCAGCAGCAT AAGAGCCTGG GTCGTATCTA CGATATGTAC GAGAAGCCAA TTGGCCATGT GCAGTATACG ATTCAAAAGT TCTACCGTAT CAACGGTGGT AGTACGCAGC TTAAGGGCGT AACCCCGAAC ATTGCTTACC CAAGTGCGTT AGAGCCGGGT GAATACGGTG AAGCGGAAGA GAAGAATGCT CTACCTTGGG ACAAAGTGCC GATGGCGCAA TACGGTACGC TAAACGACAT CACTCCTGAG TTAGTGGCGA GTTTAGAGAA AAAACACCTT GCCCGTATTC AGAACGATGT TGAGTTTAAC TATATCAATC AAGATATTGC CGACTTTAAA AAGCATCATA AAGAGAAAAC TGTCTCCTTA GTTGAAAGTG AGCGTATTGC CTCACGTGAA GCCGATGAGA AGAAAGTCCT CGATAGAACC AACGAGCGTC GTGTTGCCCA TGGTTTAGCC GCGGTTAAAT CGATGGAAGA CATTAAAGAC AAAGACGATG TTGAAGCACC GGATGCCTTC TTAGACGAAA CGGCCTATAT CACCTTAGAT ATGGCGGATG CAAAAAAGCT GGCTAACGCT GGCACTAAAT AG
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Protein sequence | MRKLTLATSI ATVFVGFSAW AVPPTIQISE LPTLKQEAQH KVASKRVTDL YTRSHYHRFA LDDAFSAQIF DRYLQQLDYR RNVLTQADVD SFKPYTNQFD DMLSSGDLDP AYKMFDLVQK RRYEGFVYAL SLLDKEMDFT VPGDAYEYDR EDAAWPKDQA EINELWRQRV KYDALNLKLT GKKWPEIVDI LQKRYNNAIK RLTQTNSEDV FQAVMNAFSR SIEPHTSYLS PRNAERFQME MNLSLEGIGA QLQLEDDYTV IKSLIAGGPA ASSEKLSPED KIVGVGQEGG EIVDVIGWRL DDVVDLIKGP KGSKVILQIL PKKGGSNAKP FNLTLVRDKI RLEDRAATSK IIEPKDGEYA NRKVGVIQIP GFYMNLSQDV EKELVKLNEA KVEGVVIDLR GNGGGALTEA VLLTGLFIDM GPVVQVRDAD GRVSAHRDND GKTTYAGPLT IMVDRYSASA SEIFAAALQD YDRALIVGES SFGKGTVQQH KSLGRIYDMY EKPIGHVQYT IQKFYRINGG STQLKGVTPN IAYPSALEPG EYGEAEEKNA LPWDKVPMAQ YGTLNDITPE LVASLEKKHL ARIQNDVEFN YINQDIADFK KHHKEKTVSL VESERIASRE ADEKKVLDRT NERRVAHGLA AVKSMEDIKD KDDVEAPDAF LDETAYITLD MADAKKLANA GTK
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