Gene Shewana3_1757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1757 
Symbol 
ID4478644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2071180 
End bp2071623 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content51% 
IMG OID639726340 
Product17 kDa surface antigen 
Protein accessionYP_869396 
Protein GI117920204 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000073012 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATTT GTGCTTTAGT GATTTCTCCC GTGCAAGCAG GCTACGATCG TAATCAGGCT 
GTGCCGGTCG AAAAAGTCCT CTATGGCGAT ATTAACTCGG TACGCAATAT CACCGAAACC
CAATTGATTG AAGACAGAAA CCAAGGTTGG AAAACCTTTG GTGGCGCCTT AGCGGGTGGG
GTGATTGGGC ATCAATTTGG TGGCGGCTCA GGCCAAGATA TCGCGACAGT GTTGGGGGCG
TTGATTGGCG CTGGTGTTGG CAATCGTTAT GGCAGTGGCA CTACGGTGCA ATCACTTAAG
CTAGTGGAGC TGATGATCAC TCAGGAAGAT GGCACGCAAG TCATGGTGAT CCAAGATTAT
GATCCCGGCA TGGTGTTCAA TGCGGGGGAT AGGGTACGAG TGGTGTACCT GCAAGGTGGG
GTTCGCGTTG ATTTAGCCAT GTGA
 
Protein sequence
MFICALVISP VQAGYDRNQA VPVEKVLYGD INSVRNITET QLIEDRNQGW KTFGGALAGG 
VIGHQFGGGS GQDIATVLGA LIGAGVGNRY GSGTTVQSLK LVELMITQED GTQVMVIQDY
DPGMVFNAGD RVRVVYLQGG VRVDLAM