Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1757 |
Symbol | |
ID | 4478644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2071180 |
End bp | 2071623 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639726340 |
Product | 17 kDa surface antigen |
Protein accession | YP_869396 |
Protein GI | 117920204 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3133] Outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000073012 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTATTT GTGCTTTAGT GATTTCTCCC GTGCAAGCAG GCTACGATCG TAATCAGGCT GTGCCGGTCG AAAAAGTCCT CTATGGCGAT ATTAACTCGG TACGCAATAT CACCGAAACC CAATTGATTG AAGACAGAAA CCAAGGTTGG AAAACCTTTG GTGGCGCCTT AGCGGGTGGG GTGATTGGGC ATCAATTTGG TGGCGGCTCA GGCCAAGATA TCGCGACAGT GTTGGGGGCG TTGATTGGCG CTGGTGTTGG CAATCGTTAT GGCAGTGGCA CTACGGTGCA ATCACTTAAG CTAGTGGAGC TGATGATCAC TCAGGAAGAT GGCACGCAAG TCATGGTGAT CCAAGATTAT GATCCCGGCA TGGTGTTCAA TGCGGGGGAT AGGGTACGAG TGGTGTACCT GCAAGGTGGG GTTCGCGTTG ATTTAGCCAT GTGA
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Protein sequence | MFICALVISP VQAGYDRNQA VPVEKVLYGD INSVRNITET QLIEDRNQGW KTFGGALAGG VIGHQFGGGS GQDIATVLGA LIGAGVGNRY GSGTTVQSLK LVELMITQED GTQVMVIQDY DPGMVFNAGD RVRVVYLQGG VRVDLAM
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