Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1731 |
Symbol | cysB |
ID | 4479564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2039604 |
End bp | 2040578 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639726314 |
Product | transcriptional regulator CysB |
Protein accession | YP_869370 |
Protein GI | 117920178 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00171097 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.293254 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTGC AACAGCTCAG GTATATTGCT GAGGTCGTCA AACACAACCT TAACGTATCG GCCACCGCGG AAAATTTATA TACATCGCAA CCTGGGATCA GTAAGCAAGT TCGCATGTTG GAAGATGAAT TAGGCATTCA AATCTTCGGT CGCAGCGGTA AACATTTGAC CCACGTGACA CCCGCCGGAC AACAGGTGAT AAATATCGCC AATGACATCT TAGGCAAAGT TGAAAGCATC AAAAAAGTCT CCGAGGAATA CACTAAACCT GATCAGGGGG AATTGAATAT CGCGACCACG GATACGCAGG CGCGGTATGC GTTACCCCAT ATCATTCGCC AGTTCATTGA CCGTTATCCT AAAGTCAACC TGCATATGCA CCAAGGCACG CCATCGCAGA TCAGCGAACA AGCGGCGCGT GGCGATGCTG ACTTTGCGAT TGCCACCGAA GCGATGCACT TGTATTCCGA CTTAATCATG TTGCCTTGTT ACCATTGGAA TCGCTCGGTT GTGGTTCCCA AAGATCATCC CTTGGCGACC CGTACCCATA TCAGTATTGA AGATTTAGCC CGTTTCCCAT TAGTCACTTA TGTGTTTGGT TTTGACCGTG CCTCGGAAAT TGAAAAAGCC TTTAACCGCG CAAACCTCGA GCCGCGGGTG GTCTTTAGTG CGACCAGCGC CGATGTGCTG AAAACCTATG TACGTTTAGG CTTAGGAGTC GGGGTGATAG CCTCGATGGC GATTGACCCT AATATCGATA AAGACTTAGT GGCTATCGAT GCGGGCCATT TATTTGCCCA CAGCACGACT AAGATTGGTT TTAGAAAAGG CAGTTTCTTA CGTAGTTATA TGTATGATTT TATTCAACAC TTTGCACCGC ATTTGACTCG CGATGTCGTT GAAAAGGCGG TGGCATTACG CGATCAGCAA TTGATTGATG AAATGTTTGC CGATAAAAAC TTGCCAATGC GTTGA
|
Protein sequence | MKLQQLRYIA EVVKHNLNVS ATAENLYTSQ PGISKQVRML EDELGIQIFG RSGKHLTHVT PAGQQVINIA NDILGKVESI KKVSEEYTKP DQGELNIATT DTQARYALPH IIRQFIDRYP KVNLHMHQGT PSQISEQAAR GDADFAIATE AMHLYSDLIM LPCYHWNRSV VVPKDHPLAT RTHISIEDLA RFPLVTYVFG FDRASEIEKA FNRANLEPRV VFSATSADVL KTYVRLGLGV GVIASMAIDP NIDKDLVAID AGHLFAHSTT KIGFRKGSFL RSYMYDFIQH FAPHLTRDVV EKAVALRDQQ LIDEMFADKN LPMR
|
| |