Gene Shewana3_1715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1715 
Symbol 
ID4479548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2019689 
End bp2020201 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content46% 
IMG OID639726298 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_869354 
Protein GI117920162 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000065025 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.148419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGAAG CCAAAATGAT TATACAAACA GAGCGTTTAA TACTCAGGCC ATTTACCGAG 
CAGGATATCG ATGCCCTCTA TTTGATGAAC AGTAACCCTG CGATGTTGAA ATACATTCCA
ACCGTGCCTT TTACTGAGCG TGAGCAGGCA CGTGAACTGT TCCATAACGT GATTTCGCAG
GATTATCAGC AGCGAGGATT TGGTCGCTGG GCGGTGGAGC ATAAAGCCGA TAATAAAGTG
ATTGGCTTTT GCGGACCAAA GTTTATTCCT GAATATAACG AAGTCGAAAT TGGCTATCGC
TATTTCCCCG AGTATTGGGG CAAGGGGATT GGTACCGAAG CTGCTCAAGC GGCAATTAGC
GTGTTCCCGC AGTTTGGCAT TACGCAAATC ATTGCATTGA TCCTAGAGGG TAACATTGGC
TCTGAAGGCG TTGCTAAACG CATAGGCATG CATTGGCGTG AACCTAGCGA GTTTATGGGG
CATAAAGTGA ATGTCTACGC AAAGGTGCTC TAA
 
Protein sequence
MKEAKMIIQT ERLILRPFTE QDIDALYLMN SNPAMLKYIP TVPFTEREQA RELFHNVISQ 
DYQQRGFGRW AVEHKADNKV IGFCGPKFIP EYNEVEIGYR YFPEYWGKGI GTEAAQAAIS
VFPQFGITQI IALILEGNIG SEGVAKRIGM HWREPSEFMG HKVNVYAKVL