| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1656 |
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| Symbol | |
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| ID | 4476111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1946279 |
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| End bp | 1947163 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639726239 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_869295 |
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| Protein GI | 117920103 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00451745 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAACG GAAGCATCGT AGCCTTAATC ACGCCAATGA ACAGTGATGG CTCAGTAGAT
TTTGCAAGTC TTGAAAGGTT AGTCGAATTC CATATTGACC AAGGCACAGA CGCCATCGTC
GCCGTGGGCA CTACCGGCGA GTCAGCGACT CTGCCAATGA ATGAGCACGT TACTGTGGTC
GCGCAAACGG TTAAGTTTGC CGCAGGCCGT ATTCCTGTGA TTGGTGGCAA TGGCGCGAAT
GCGACATCTG AAGCTATCGA ACTCACCAAG TCTTTATCTA AAGTAGGGGT TGCCGCCATG
TTAGGCGTGA CACCTTACTA CAACAAGCCC ACGCCAAAGG GCTTAGTCGC GCACTATAAA
GCGGTCGCGG CGAGCACGGA TATTCCGCAA ATTCTCTATA ACGTACCAGG ACGCACCGCC
GTCGACATGA AGCCCGAAAC CGTGGCCGAA TTGGTCGCTG TGAGCAATAT TATTGGTGTT
AAAGAAGCCA CGGGTGATGT ATCACGCGTA CAGCGTTTAC GTGAGCTTTG CGGTAATGAC
TTTATGTTGT ACAGCGGCGA TGACGCAACG GCGAGGGAGT TTTTACTCCT TGGCGGTAAT
GGCGTGATTT CGGTTGCTAA CAACATAGTG CCAAAAGCAT TTAAAGCCAT GTGTGATGCA
GCACTGGCGG GCAACGCCGA ATTAGCGGCG AGCATCGATG AGCCGCTGCG TGGTCTGTAT
AGCACACTGT TCTGTGAAGC GAACCCAATT CCTGTGAAGT GGGCCGCCCA CCGTATGGGA
CTGATTGAGT GTGGCCATAT TCGTTTACCT TTGACTGAAC TTTCTGAGCA ATGTCATGGT
CTGTTGTTAG ATGCAATGAC TCGCGCCCAG ATAGAGGTTA AATAA
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| Protein sequence | MINGSIVALI TPMNSDGSVD FASLERLVEF HIDQGTDAIV AVGTTGESAT LPMNEHVTVV
AQTVKFAAGR IPVIGGNGAN ATSEAIELTK SLSKVGVAAM LGVTPYYNKP TPKGLVAHYK
AVAASTDIPQ ILYNVPGRTA VDMKPETVAE LVAVSNIIGV KEATGDVSRV QRLRELCGND
FMLYSGDDAT AREFLLLGGN GVISVANNIV PKAFKAMCDA ALAGNAELAA SIDEPLRGLY
STLFCEANPI PVKWAAHRMG LIECGHIRLP LTELSEQCHG LLLDAMTRAQ IEVK
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