| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1624 |
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| Symbol | |
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| ID | 4476588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1911885 |
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| End bp | 1913798 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639726207 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_869263 |
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| Protein GI | 117920071 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0743651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATT GGTCTATTGA TGCTGCTCGT GCTGGGTACA ACGTTACCCA CTGGAGCCAA
GGGTTTTATG GGATCAGCGA CCAAGGTGAG GTGACAGTGT CGCCGGATCC TAAGAATCCT
GATCACAAGA TTGGCTTAAA TGAGCTAGCA AAAGACATGG TTAAAGCAGG GGTCGCTTTA
CCTGTATTAG TTCGTTTCCC GCAAATTCTG CACCACAGAG TGAACAGTTT GTGCCAAGCA
TTCGACCAAG CGATACAAAA ATATGAGTAT CAGGCGGACT ATTTGCTGGT TTACCCCATT
AAAGTAAACC AACAAAAAAC TGTGGTAGAA GAGATCCTTG CGAGCCAAGC ATCAAAAGAA
GTTCCACAAT TAGGCCTAGA AGCCGGCAGT AAGCCAGAAT TAATGGCCGT GTTGGCCATG
GCGCAAAAAG CCAGTTCAGT GATCGTATGT AACGGTTACA AAGATAACGA ATACATTCGT
TTAGCCTTAA TTGGTGAAAA GTTAGGCCAT AAGGTCTACA TCGTTTTAGA AAAACTGTCT
GAGTTGAAGA TGGTGTTGGC CGAGTCTAAG CGTCTAGGGG TGAAACCTCG CTTAGGTCTA
CGTGCTCGCC TTGCTTTCCA AGGTAAAGGC AAGTGGCAAG CCAGCGGCGG TGAAAAGTCT
AAGTTTGGTT TATCAGCAGC GCAAATTCTG ACCGTGGTTG ATCAGTTAAA ACAAGAGGAT
ATGTTAGATT CTCTGCAGTT ACTGCACTTC CACTTAGGTT CACAAATCGC CAACATCCGT
GATATTCGTC AAGGTGTGAG CGAAGCGGCG CGTTTCTACT GTGAATTACG TGAGTTAGGC
GCCAGCATTA ACTGCTTCGA CGTCGGCGGT GGTTTAGCGG TGGATTACGA CGGTACCCGT
AGCCAAAGTA ACAACTCAAT GAACTATGGC TTAAGCGAAT ACGCGAACAA CATCGTCAAC
GTGCTTACCG ATATCTGTAA TGAATACGAG CAACCTATGC CACGTATTAT TTCAGAATCT
GGCCGTCACT TAACGGCGCA CCATGCAGTG TTGATCACCG ATGTGATTGG TACTGAAGCC
TATCAAGTCG AAGAAATTCA GCCACCTGCG GAAGAGTCAC CACAGCTGCT GCACAACATG
TGGCAATCTT GGACTGAGAT AAGCGGCCGC GCTGACCAAC GTGCTTTGAT TGAGATTTAC
CACGATAGCC AAAGTGACCT GCAAGAAGCG CAATCGCTGT TTGCCTTGGG TCAATTAAGC
TTGGCAGAAC GTGCGTGGGC TGAGCAGGCT AACCTGCGTG TATGCCACGA AGTGCAAGGT
TTGTTAAGCA CCAAAAACCG TTACCACAGA CCGATTATCG ATGAGTTAAA CGAAAAGTTA
GCCGATAAGT TCTTCGTTAA CTTCTCATTA TTCCAATCGT TACCGGATGC TTGGGGTATC
GATCAGGTGT TCCCTGTGCT GCCACTGTCT GGTTTAGACA AGGCGCCAGA GCGCCGTGCC
GTGATGCTGG ACATCACCTG TGACTCTGAC GGTATTGTTG ACCAATACGT AGACGGTCAA
GGGATTGAAA CCACGCTGCC AGTGCCGGCT TGGAGCGCTG AAAGTCCTTA TCTGATGGGC
TTCTTTATGG TTGGCGCCTA TCAAGAGATC TTAGGTGATA TGCACAACCT GTTTGGTGAT
ACCAACTCTG CGGTGGTCAG CATCGAAGAG AACGGTATGA CCAACATTGA GTCGGTCCTT
GCCGGTGATA CGGTTGCTGA CGTATTGCGC TATGTTAACT TAGATGCCGT TGACTTTATG
CGTACTTACG AAGAGTTAGT GAATCAGCAC ATTGCCGAAG AAGAACGCGC CCAGATTTTA
GAAGAACTGC AAGTGGGCCT AAAAGGTTAC ACTTATTTAG AAGATTTTTC TTAA
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| Protein sequence | MNDWSIDAAR AGYNVTHWSQ GFYGISDQGE VTVSPDPKNP DHKIGLNELA KDMVKAGVAL
PVLVRFPQIL HHRVNSLCQA FDQAIQKYEY QADYLLVYPI KVNQQKTVVE EILASQASKE
VPQLGLEAGS KPELMAVLAM AQKASSVIVC NGYKDNEYIR LALIGEKLGH KVYIVLEKLS
ELKMVLAESK RLGVKPRLGL RARLAFQGKG KWQASGGEKS KFGLSAAQIL TVVDQLKQED
MLDSLQLLHF HLGSQIANIR DIRQGVSEAA RFYCELRELG ASINCFDVGG GLAVDYDGTR
SQSNNSMNYG LSEYANNIVN VLTDICNEYE QPMPRIISES GRHLTAHHAV LITDVIGTEA
YQVEEIQPPA EESPQLLHNM WQSWTEISGR ADQRALIEIY HDSQSDLQEA QSLFALGQLS
LAERAWAEQA NLRVCHEVQG LLSTKNRYHR PIIDELNEKL ADKFFVNFSL FQSLPDAWGI
DQVFPVLPLS GLDKAPERRA VMLDITCDSD GIVDQYVDGQ GIETTLPVPA WSAESPYLMG
FFMVGAYQEI LGDMHNLFGD TNSAVVSIEE NGMTNIESVL AGDTVADVLR YVNLDAVDFM
RTYEELVNQH IAEEERAQIL EELQVGLKGY TYLEDFS
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