Gene Shewana3_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1622 
Symbol 
ID4476586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1909131 
End bp1909787 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content51% 
IMG OID639726205 
Producthypothetical protein 
Protein accessionYP_869261 
Protein GI117920069 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.138254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCA CGTTACACGA AGCCAGAGTT ATCGGTTGCC TACTTGAAAA AGAAGTCACC 
ACCCCAGAGC AATACCCGCT TTCACTCAAT GCCCTGACCC TCGCCTGTAA TCAAAAAACC
AGCCGCGATC CCGTATTGGA CTTAAGTGAG GCGCAGGTTC AAGACGCCCT CGATTCATTG
AATAAAAAGC GCTTAATCAG CGAACAATCC GGCTTTGGTA GCCGAGTCGT CAAATATAAG
CACAGATTCT GCAACACCGA ATTTAGCGAG TTACAACTTT CGAGCGCTGC GGTAGCCATT
GTCTGTTTGC TGCTGCTTCG CGGCCCACAA ACGCCGGGCG AATTGCGTAC CCGCAGCAAC
AGGCTGCATG ACTTTAAAGA TGTGCTCGAA GTGGAAGCCT GCATTAAGCA ACTGATGGAG
CGAGATAAAC CCGTGCTAGC CCAACTGCCA CGGGAGCCGG GTAAGCGTGA ATGCCGTTAC
ACTGAGCTGT TCTCCCAAGG TGCTGAGCAA ATTAGCGCCG CGTCATTCAC CAGTGCCGAC
GCACACCCGC TAAACGAGCA GGATAGACAA CAACTGGAAG CAAGAGTCAC GCAGCTTGAA
GAGCAAGTGG CTGAACTTAA AGATAAGTTA GACTCACTTA TCGCTTCTTT ATCCTAA
 
Protein sequence
MELTLHEARV IGCLLEKEVT TPEQYPLSLN ALTLACNQKT SRDPVLDLSE AQVQDALDSL 
NKKRLISEQS GFGSRVVKYK HRFCNTEFSE LQLSSAAVAI VCLLLLRGPQ TPGELRTRSN
RLHDFKDVLE VEACIKQLME RDKPVLAQLP REPGKRECRY TELFSQGAEQ ISAASFTSAD
AHPLNEQDRQ QLEARVTQLE EQVAELKDKL DSLIASLS