Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1622 |
Symbol | |
ID | 4476586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1909131 |
End bp | 1909787 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639726205 |
Product | hypothetical protein |
Protein accession | YP_869261 |
Protein GI | 117920069 |
COG category | [S] Function unknown |
COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.138254 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCA CGTTACACGA AGCCAGAGTT ATCGGTTGCC TACTTGAAAA AGAAGTCACC ACCCCAGAGC AATACCCGCT TTCACTCAAT GCCCTGACCC TCGCCTGTAA TCAAAAAACC AGCCGCGATC CCGTATTGGA CTTAAGTGAG GCGCAGGTTC AAGACGCCCT CGATTCATTG AATAAAAAGC GCTTAATCAG CGAACAATCC GGCTTTGGTA GCCGAGTCGT CAAATATAAG CACAGATTCT GCAACACCGA ATTTAGCGAG TTACAACTTT CGAGCGCTGC GGTAGCCATT GTCTGTTTGC TGCTGCTTCG CGGCCCACAA ACGCCGGGCG AATTGCGTAC CCGCAGCAAC AGGCTGCATG ACTTTAAAGA TGTGCTCGAA GTGGAAGCCT GCATTAAGCA ACTGATGGAG CGAGATAAAC CCGTGCTAGC CCAACTGCCA CGGGAGCCGG GTAAGCGTGA ATGCCGTTAC ACTGAGCTGT TCTCCCAAGG TGCTGAGCAA ATTAGCGCCG CGTCATTCAC CAGTGCCGAC GCACACCCGC TAAACGAGCA GGATAGACAA CAACTGGAAG CAAGAGTCAC GCAGCTTGAA GAGCAAGTGG CTGAACTTAA AGATAAGTTA GACTCACTTA TCGCTTCTTT ATCCTAA
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Protein sequence | MELTLHEARV IGCLLEKEVT TPEQYPLSLN ALTLACNQKT SRDPVLDLSE AQVQDALDSL NKKRLISEQS GFGSRVVKYK HRFCNTEFSE LQLSSAAVAI VCLLLLRGPQ TPGELRTRSN RLHDFKDVLE VEACIKQLME RDKPVLAQLP REPGKRECRY TELFSQGAEQ ISAASFTSAD AHPLNEQDRQ QLEARVTQLE EQVAELKDKL DSLIASLS
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