Gene Shewana3_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1552 
Symbol 
ID4478776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1808697 
End bp1809896 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content49% 
IMG OID639726122 
Productacetate kinase 
Protein accessionYP_869192 
Protein GI117920000 
COG category[C] Energy production and conversion 
COG ID[COG0282] Acetate kinase 
TIGRFAM ID[TIGR00016] acetate kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.357591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.201508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAATA AACTGGTTTT AGTACTCAAT TGCGGTAGCT CTTCACTCAA ATTTGCCGTC 
ATTGACGCGC AAACAGGTGA CGATCAGATC TCTGGCCTAG CCGAGTGTTT TGGCTTAGAA
GACTCGCGCA TTAAATGGAA AATCAACGGT GAAAAGCATG AATCCTCTTT AGGTGCATTT
ACCGCTCACC GCGAAGCCGT TGAATTTATT GTCAATAAAA TCCTTGCTGG TCAACCTGAA
TTAGCCGCGC AGATCCAAGC CGTGGGTCAC CGTATCGTAC ACGGCGGTGA GAAGTTCACT
CGCTCTGTGA TCATCGACGA GCATGTGATC AAAGGTATTG AAGAATGTTC TTCACTGGCG
CCACTGCATA ACCCAGCACA CCTTATCGGT ATTCGCGCGG CCATTGCATC TTTCCCTAAA
CTGCCACAAG TGGCGGTATT CGATACTGCA TTCCACCAAA GCATGCCTGA GCGCGCGTAC
ATCTACGCTC TACCATACAA GCTGTACCGT GAGCATGGTA TTCGCCGTTA TGGTATGCAC
GGCACTAGCC ACCTGTTTGT GAGTCGTGAA GCCGCTAAAG TGTTGAACAA ACCTTTAGAA
GAAACCAATG TGATCTGCGC GCATTTAGGT AACGGCGCCT CGGTGACTGC GGTTAAAGGC
GGTAAGAGCG TTGATACCTC AATGGGACTG ACGCCGCTTG AAGGTTTAGT CATGGGTACT
CGCTGTGGCG ATCTCGACCC CTCTATCATC TACCACTTAG TGCACCAACT GGGTTACACA
CTGGAAGAAG TCAACAACCT GATGAACAAG CAAAGTGGTC TGCTAGGGAT TTCTGAGCTG
ACCAACGATT GCCGTGGCAT CGAAGAAGGT TATGCCGATG GTCACAAAGG CGCGACCTTA
GCACTGGAAA TCTTCTGCTA CCGTCTGGCG AAATATATCG CGTCTTACAC TGTGCCGCTC
GGTCGTTTAG ATGCCGTAGT CTTTACCGGT GGTATCGGCG AAAACTCCGA CATCATCCGC
GAGAAAGTGC TCAACATGCT GCAAATCTTC AATTTCCATG TGGATAGCGA GCGTAACAAA
GCGGCCCGCT TCGGCAAGAA AGGCATCATC ACCACTGACA ACAGTACCGT TGCCATGGTC
ATCCCGACCA ACGAAGAGTG GGTTATCGCC GAAGATTCGA TTAAACTCAT TACAAAATAA
 
Protein sequence
MSNKLVLVLN CGSSSLKFAV IDAQTGDDQI SGLAECFGLE DSRIKWKING EKHESSLGAF 
TAHREAVEFI VNKILAGQPE LAAQIQAVGH RIVHGGEKFT RSVIIDEHVI KGIEECSSLA
PLHNPAHLIG IRAAIASFPK LPQVAVFDTA FHQSMPERAY IYALPYKLYR EHGIRRYGMH
GTSHLFVSRE AAKVLNKPLE ETNVICAHLG NGASVTAVKG GKSVDTSMGL TPLEGLVMGT
RCGDLDPSII YHLVHQLGYT LEEVNNLMNK QSGLLGISEL TNDCRGIEEG YADGHKGATL
ALEIFCYRLA KYIASYTVPL GRLDAVVFTG GIGENSDIIR EKVLNMLQIF NFHVDSERNK
AARFGKKGII TTDNSTVAMV IPTNEEWVIA EDSIKLITK