Gene Shewana3_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1545 
Symbol 
ID4478769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1802402 
End bp1803313 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content52% 
IMG OID639726115 
Producthypothetical protein 
Protein accessionYP_869185 
Protein GI117919993 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000013291 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.113881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTT TTATAGATGC ACTGGCGACG ATAGAAGTCG GTGAAGATGC CACGCGATTA 
TTCCATGGCC GCGGTGGTTA TTACCCTGGC TGCGAACATC TTTGTTTAGA TTGGTTCGCG
CCAGTATTGT TATTGACCAG TTTTATTCCC CTCGATGCGG CTGAGTTGGC CGAGTGCCAA
CAGGCGATTA CGGCGCGCTG GCAAGCGATA CAGCCCAATC GGTTGTTAAA CTTGGTGTAT
CAATACCGCA GTGCAGGCGA AACCTTTAGC CAAGTACTGG CGGGTGAGGT GCCCGATCCC
CATGTGGTCA CCGAGAACGG CGCCCAGTTT CAGGTGCATT TATTGCGGGG ACAAAACCAC
GGTTTGTTCC TTGATATGGC CAATGGCCGT GAATGGGTCA GAGCCCATGC TCGCCATAAG
AAAGTGCTGA ATTTGTTTGC TTATACCTGT GGTTTCTCGG TGGCAGCACT GCAGGGCGGC
GCCGATGAAG TCGTGAACAT GGACATGAGT AAAGGCGCGT TAGCCATAGG CAAGCAGAAT
CATCTTCTCA ATGGCTTTAG CGCGGGCGCA CGTTTCTTAG GGCACGATAT TTTTAAGTCA
TGGGGTAAGT TACGCAAGTT AGGCCCCTAT GACATAGTTG TTGCCGATCC GCCGAGTAAT
CAAAAGGGCA GTTTCGTGGC GACTAAGGAT TACGTGCGTT TGATCAGGCA TTTACCCGAG
TTGTTAGCCG AGAATGCCGA GGTGCTACTC TGCTTAAATG CACCGGAACT CGATACTCAA
TTTTTGCGCC AGCAGGTCGA AGACGCAGCG CCCGCGCTCG AATTCCTTGA GCGCTTACCC
AATCCCGCCG CATTTGTTGA TGTTTCTGAG GAGAAATCAT TAAAGGTGCT GCGCTACCGC
TTAAAGGCGT AA
 
Protein sequence
MQRFIDALAT IEVGEDATRL FHGRGGYYPG CEHLCLDWFA PVLLLTSFIP LDAAELAECQ 
QAITARWQAI QPNRLLNLVY QYRSAGETFS QVLAGEVPDP HVVTENGAQF QVHLLRGQNH
GLFLDMANGR EWVRAHARHK KVLNLFAYTC GFSVAALQGG ADEVVNMDMS KGALAIGKQN
HLLNGFSAGA RFLGHDIFKS WGKLRKLGPY DIVVADPPSN QKGSFVATKD YVRLIRHLPE
LLAENAEVLL CLNAPELDTQ FLRQQVEDAA PALEFLERLP NPAAFVDVSE EKSLKVLRYR
LKA