Gene Shewana3_1532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1532 
Symbol 
ID4477428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1784046 
End bp1785230 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content50% 
IMG OID639726102 
Producthypothetical protein 
Protein accessionYP_869172 
Protein GI117919980 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.159244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000103674 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAAAACC GCCTAACACT CATCGCAATC TTCAGCTTAA CGATGTTAGT AACAGCCTGT 
GGCGGCGGTG ACAGCCAAAG CAACGACAAT GGCCAAACGC CGACTCCGCC AACGACACCG
ACTGTACCGA CAACGCCCAC CAGTCTGTGC GTGAATACCA CAGGGCAAGT TAACTGGCCC
GCCTTAATGG CAGAGGACTG CCCAGAGTTA AGTCAATACG GGCTCTTTAT CGACCCCGCA
AACCCTACCG CGCAGCCGCA AGCACCGGGA TTTGGTTATC AGCTCGCCAC ACAGCTTTTT
TCTAATTACG CCAGTAAATA CCGCTTTATC TATTTACCCG CAAGCAGCAG CATGCAATAC
CAAGCGCAGG AAGCATTCGA GTTTCCAACT AGCGCCGTAC TGGTCAAAAC CTTTGCTCTG
CCACAGGATA CGGCTATCAA AGGCATAGCC AATGAAACCC TTATCGAAAC ACGGCTATTG
ATAAAACGCC CCCAAGGCTG GACGAGTCTG GTTTATCAAT GGCAACAAGG TGAAGCAAAG
CTGCTAACCG CGGGCGCAAG CGTGCACCAT ACCCTGATTA ATCAAGGTCA AAACCAAAGC
TTCGATTACA ACATTCCGAG CCGCGCCGAG TGCAAAATTT GCCACCAAAT CAACCAAGAT
AACAGCAGCC AAATCATTCC GATTGGCCTT AAAGCCCATC TCTTGAATCG CGATATCATC
GACCAAGGGC AAAGTGTCAA TCAACTCAGT CTCTGGGCTA AACAAGGCAA GCTTGAGCTG
TTACCCGAGT TAAGCCAAGT CGCTAAAACC TATGCCATAG ACAACCTCCA AGCCGATTTA
ACCAGCCGTG CTAAGGGCTA TTTAGATGTT AACTGCGCCC ATTGCCACAG CGCCAAAGGC
TATGCCAGCA TCTCCGGCTT ACGCCTTGGG TTTTATATCG ACCATACCAG TTATCAATAT
GGGATCTGCA AACAACCACC CGGCTGGGAT GGTGGCCCTA AAGGACTCGA TTACGATATC
GTCCCCGGCA ATGCTGACCA TTCGATTTTG CTCTATCGCC AAACGCTGTC AGAACCTAAG
GACCGCATGC CGCCCATCGG CCGCAACCTT GAGCACCAAG AAGGCGTGGA ATTAATTCGT
CAATGGATAG ATTCACTGGC ACCGAGTTTA GGGAATTGTA CTTAG
 
Protein sequence
MKNRLTLIAI FSLTMLVTAC GGGDSQSNDN GQTPTPPTTP TVPTTPTSLC VNTTGQVNWP 
ALMAEDCPEL SQYGLFIDPA NPTAQPQAPG FGYQLATQLF SNYASKYRFI YLPASSSMQY
QAQEAFEFPT SAVLVKTFAL PQDTAIKGIA NETLIETRLL IKRPQGWTSL VYQWQQGEAK
LLTAGASVHH TLINQGQNQS FDYNIPSRAE CKICHQINQD NSSQIIPIGL KAHLLNRDII
DQGQSVNQLS LWAKQGKLEL LPELSQVAKT YAIDNLQADL TSRAKGYLDV NCAHCHSAKG
YASISGLRLG FYIDHTSYQY GICKQPPGWD GGPKGLDYDI VPGNADHSIL LYRQTLSEPK
DRMPPIGRNL EHQEGVELIR QWIDSLAPSL GNCT