| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1530 |
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| Symbol | |
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| ID | 4477426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1781664 |
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| End bp | 1782680 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639726100 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_869170 |
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| Protein GI | 117919978 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000234628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000765641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | TTGGAATTTC TATACGAATA TGGCATGTTT TTAGCGAAAG CCGTGACGAT TGTGGTTGCG
CTTGTAGCTG TGATTATTGT GGTGCTCGCG TCCACGGTGA AGCACAAATC GGATAAAGGT
GAACTGAGGA TCACCAACCT TTCAGAAGAA CTGGAAGAGC TTAAACACAG CTTGAAGGAA
GAACTGCTGT CGAAGAAGCA GTTTAAAGCC TACGAAAAAC AGCTGAAAGC AGACGAAAAA
GCAAAGGAAA AAACGGCCGA AGAAGACAGC AAAGGCAAAG TTTTTGTTAT TGATTTTAAA
GGCAGTATTG ATGCCGCCGA AGTGGCTTCT CTGCGGGAAG AAATCAGCGC GATTTTAACC
ATCGCCGAAA AGGGCGATGA AGTGGTGGTG AATGTCGAAA GTGGTGGAGG CATGGTACAT
GGCTACGGTT TAGCCTCTAG CCAGCTTGAC CGCCTGCGTC AGGCAGAGAT CCCATTAACG
ATTTGCGTGG ATAAGGTCGC TGCCAGCGGT GGTTATATGA TGGCCTGTGT GGCAAACAAA
GTGTATGCCG CGCCATTCGC CATCGTAGGC TCAATCGGTG TCGTTGCCCA GTTGCCTAAC
TTCAACCGTT TATTGAAGAA ACATGAAATC GACTACGAGC AACATACGGC CGGTGATTTT
AAACGCACCT TAACCGTTTT TGGCGAGAAT ACTGACGAAG GCAGACAGAA GTTCCAACAG
GAGCTGGAAG AAACCCATGT ATTGTTTAAA GCTTTCGTGA GCAAATATCG TCCTCAGCTC
GACTTGGCAA AGGTGGCCAC GGGTGAACAT TGGTACGGTC AACAGGCGAT TGAATTAGGC
CTTATCGATG CGATTTCAAC CAGTGATGAT GTGTTAATGC AGTTAGCTGG CGAACGTACC
GTCTACAAGT TGCGCTATCA AGTCCGTAAG AAGTTGGCCG ACAAAATCGC CCATGGTGCG
TCCTTATCGG TCAATGCGAT TTTTAATCGC TTAGTTGAGA AAAATCGTCC CATGTAA
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| Protein sequence | MEFLYEYGMF LAKAVTIVVA LVAVIIVVLA STVKHKSDKG ELRITNLSEE LEELKHSLKE
ELLSKKQFKA YEKQLKADEK AKEKTAEEDS KGKVFVIDFK GSIDAAEVAS LREEISAILT
IAEKGDEVVV NVESGGGMVH GYGLASSQLD RLRQAEIPLT ICVDKVAASG GYMMACVANK
VYAAPFAIVG SIGVVAQLPN FNRLLKKHEI DYEQHTAGDF KRTLTVFGEN TDEGRQKFQQ
ELEETHVLFK AFVSKYRPQL DLAKVATGEH WYGQQAIELG LIDAISTSDD VLMQLAGERT
VYKLRYQVRK KLADKIAHGA SLSVNAIFNR LVEKNRPM
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