Gene Shewana3_1503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1503 
Symbol 
ID4478140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1750675 
End bp1751487 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content51% 
IMG OID639726073 
Productexonuclease III 
Protein accessionYP_869143 
Protein GI117919951 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.073629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG TTTCTTTCAA TATCAATGGA TTGCGTTCTC GCCTGCATCA ATTGCAAGCG 
TTAATCGACA GCCATCAGCC CGACATTATC GGCCTGCAAG AAACCAAAGT GCACGATGAA
GCCTTCCCGC TCGCCGAAGT CGAGGCCATG GGCTATCACG TGCATTACCA CGGTGGCAAG
GCGCACTATG GCGTAGCCAT GCTCTCCAAA GTCGCCCCAC TTAAGGTGCA AAAGGGTTTT
GCAACTGATG AAGAAGATGC GCAGCGCCGC ATGATTATCG GTACCTTTGC TCAGGCAAAT
GGCCACCCGC TAACTGTGTT GAATGGTTAT TTTCCTCAGG GCGAAAGCAT CGACCATCCG
ACAAAGTACC CTGCTAAGCG CAAGTTTTAT CAGGATTTAA TGGCGCATTT GCACGCTAAT
CATAGCAACG ATGAAGATAT CGCCATCATT GGGGATATCA ATATTTCGCC CATCGATTTG
GATATCGGCA TCGGTGAAGT TAACCGCAAA CGTTGGCTAA AAACCGGCAA ATGCAGCTTC
CAACCCGAAG AGCGTGAATG GCTCAAGACC CTGCAAGGTT GGGGATTGGT GGATACCTTC
CGTCAACTGC ACCCCGACCG CTGCGAGCGT TATTCATGGT TCGATTACCG CAGCAAAGGC
TTCGATGATA ACCGTGGCCT ACGCATCGAT GTGATCTTAG CGACGCCGTC ACTGGCCGCA
CGTTTAGTTG AATCCGACGT CGATTACGAG CTGCGCGGTA TCGACAAACC CTCAGATCAC
GCGCCAATTT GGAGCACCTT TAAAGAAGCC TAA
 
Protein sequence
MKIVSFNING LRSRLHQLQA LIDSHQPDII GLQETKVHDE AFPLAEVEAM GYHVHYHGGK 
AHYGVAMLSK VAPLKVQKGF ATDEEDAQRR MIIGTFAQAN GHPLTVLNGY FPQGESIDHP
TKYPAKRKFY QDLMAHLHAN HSNDEDIAII GDINISPIDL DIGIGEVNRK RWLKTGKCSF
QPEEREWLKT LQGWGLVDTF RQLHPDRCER YSWFDYRSKG FDDNRGLRID VILATPSLAA
RLVESDVDYE LRGIDKPSDH APIWSTFKEA