| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1487 |
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| Symbol | |
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| ID | 4478124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1732244 |
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| End bp | 1733413 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639726057 |
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| Product | porin |
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| Protein accession | YP_869127 |
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| Protein GI | 117919935 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.911374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA AATTGCTAGC AGTGATGATC CCTGCGGTGC TGTTGTCTGG TACAACGCAA
GCGGTCGAGC TGTATAACGA TCAAACCAAT AGCGTCAATA TGATGGGCTG GCTAGGCTTT
GCGGCGTTAA ACGATGGCCA CGAAACTTCA GTAATTGATA ACTTTTCCCG CGTGGGATTT
CGTTTCGACC GCCAAGAGAA AAATGGTTGG CGCTCCTTTG CCCATACCGA ATGGGGCATT
AACATGGTCA CCAGTGACGA TGGCCTGATC TATACCCAAG GTCAAGGTGG TGGTCAGTTA
TCGGCTTCAA AAACCTCAGA TTTCCTCTTT AACCGTTTAG GTTATGTCGG CATGTCGCAC
GACAAATGGG GCTCGCTCAC CTTTGGTAAG CAGTGGGGGG CTTATTATGA TGTGGCTTAC
ACCACTGACG TGCTCAATGC CTTTACCGGC TGGTCTGTCG GTGCTTATAC CTTTGGCGAT
GGCGGCCTCA CTGGCGCGGG GCGTGCCGAT GCAGCGCTGC AATACCGTAA TACCTTTGGC
AATCTGCATA TCGCGGTGCA ATACGCCTCT AAGCAAAATA GCGATGTGGC GCTCTATGAC
AATTTAGGAA ACGCCTTAAA CGATGGGTCT GAGCTGAGCT TCGATCCTAG CTATGGTGCG
AGTGCTACTT ACTATTTCAC CGACAAATTT AAGGTGTTAG CGGGCTTTAA CCGCGGTGAC
TTCACCGGCA ATCTTGCGGG TAAAGACGTC GATAATACCA ATCAAATCAT CGGTATCGGC
GCCCAATACG GCAGCTTCTA CCAATATGCG CCGGGTCGTG ATGCCGACGG CCTGTATGTC
GGTTTTAACG CCCATAAGAG TGAGCAAAAC GAGTTAGTGG GTGGCGATCT CTACGACTCA
ACTGGCGCCG AATTTATTGT TGCCTATCAC TACGATAACG GATTCGTACC TAGCTTATTG
CTGACTTACC AAGATTTGGA CACCGATGAA AACACCGTCA TCCAAGGTAA ATGGACCCGC
CAATTTGCCG TGTTAGGCCT GCATTATCGT TATAGCCGCG ACACTATTAT GTATGCTGAA
GCCAAAATCG ATTTCAGCGA TATGGACGAT AAAGCCTACG AAGATCTGCA GGATAACAAC
TATGCCGTTG GTATTCGTTA TTTCTTCTAA
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| Protein sequence | MKKKLLAVMI PAVLLSGTTQ AVELYNDQTN SVNMMGWLGF AALNDGHETS VIDNFSRVGF
RFDRQEKNGW RSFAHTEWGI NMVTSDDGLI YTQGQGGGQL SASKTSDFLF NRLGYVGMSH
DKWGSLTFGK QWGAYYDVAY TTDVLNAFTG WSVGAYTFGD GGLTGAGRAD AALQYRNTFG
NLHIAVQYAS KQNSDVALYD NLGNALNDGS ELSFDPSYGA SATYYFTDKF KVLAGFNRGD
FTGNLAGKDV DNTNQIIGIG AQYGSFYQYA PGRDADGLYV GFNAHKSEQN ELVGGDLYDS
TGAEFIVAYH YDNGFVPSLL LTYQDLDTDE NTVIQGKWTR QFAVLGLHYR YSRDTIMYAE
AKIDFSDMDD KAYEDLQDNN YAVGIRYFF
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