| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1486 |
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| Symbol | |
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| ID | 4478123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1729880 |
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| End bp | 1731994 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639726056 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_869126 |
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| Protein GI | 117919934 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.892881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCT ATATTGCTGA AAAACCAAGC CTTGGGCGTG CAATTGCCGA TGTGCTGCCT
AAACCCCACA AAAAAGGTGA CGGGTTTATT GAAGACGCCC AGGGCAACTG TGTGTCTTGG
TGTGTGGGGC ACTTGCTCGA ACAGGCCGAG CCCGATGCCT ATAATCCCGA GTTTAAATCG
TGGAAGTTTG AGCATTTACC CATAGTGCCC GAGAAGTGGC AGCTTAAACC TAAGGCCGCG
ACCCGAAGCC AACTCACAGT ACTTAAAAAA CTGGTTAAAC AGGCCGATAC GCTAGTGAAC
GCTGGCGATC CCGACCGTGA AGGGCAGCTA TTGGTTGATG AAGTGATCGC CTATTTGGGC
GTGACGGGCG ATAAATTACA GCAAACGCAG CGACTCCTTA TCAGTGACTT AAACCCGCAG
GCGGTGAAAC GTGCCCTGTC GCAGCTACGC AGTAACCGTG AGTTTATTCC TTTGTCGACT
TCGGCACTTG CCCGAAGCCG CGCCGATTGG CTCTATGGCA TGAATATGAC TCGGGCCTAC
ACTATTCAAG GGAAAAAGGT CGGCTATCAA GGCGTACTAT CGGTCGGTCG AGTACAGACA
CCACTGCTTG GGCTTATCGT GCGCCGCGAT GAAGAAATCG CGAACTTTCA ATCTAAGCCT
TTTTATGAGG TTCTGGCTCA CTTAGTGACG GACAAAGATC AGACTTTTAC GGCGAAGTGG
CAACCCAGTG AAGCTTGTTT ACCCTATATG GATGAGGAAG GGCGCGTGCT CGCTAAGGGC
TTAGCGCAAA ATGTGGTGCG GCGGATCACC GATAAACCCG CCAAAGTAAC CCAGTTAAGC
ACTAAGGATA AGCAGCAGAA TCCGCCTTTA CCCTACAGTT TATCGGCGCT GCAAATCGAT
GCCGCCAAGC GCTTTGGTAT GAGCGCGAAG GACGTGCTCG ATACCTGCCA GAGCTTATAC
GAGCGCCATA AGCTAATCAC CTATCCACGC TCAGACAGCC GTTATTTGCC CACAGAGCAG
CATGCGCTTG CAAGCGGGGT ATTAGCGGCC ATCATGGGTG GTGCGCCCGA GTTAGTCGCA
CACGCTGAGG CGCCGAATCC TCGGCTTAAA TCTAAGGCGT GGGATGATAA AAAAGTCGAT
GCCCATCACG CCATTATTCC AACGGAAAAA CAGCCCAATC TAGCTGGTTT AAGCCAGCGG
GAAAGACAGC TTTATCTGCA TATTGCTCGC CAGTATTTGG CACAGTTTTA CCCCGCCTAT
TGCTACAGTG AAACTGCGGT CGAGGTGACG ATCGAAGGTG GTCTTTTTAA AACTAAGGCA
AAACAGGATA AGTCCCTCGG TTGGAAACAA CTGTTTGCCA GAGAAGAGAA CGAACGAAAA
GACGCATCAT CCGCAGCGAG TTTTGCGCAA GGCGATAAGG ACGCAGAGGA AGGAGAATAT
GTTGGTCAAC TACCGCCGCT TACCTTAGGG CAAGTGCTTC ATTGTCACCA AGGTGAATTA
GTCGAGAAGC AAACTCAACC CCCCAAAGCC TTTACCGATG CGACCTTGCT GAGTGCTATG
ACAGGGATTA ACCGTTATGT GACAGATCCC GAGATCCGCA AAATTTTAAA GGAAACCGAT
GGCTTAGGTA CGGAAGCGAC TCGCGCAGGC ATTATTGAGC TGCTGTTTAA GCGAGGCTTT
ATTCAGCGTC AGGGGAAGTC GATTGTGGCC ACTGAGATAG GCAAGGGTTT AATCAATAGT
TTACCCATTA GCGCCACGAC ACCCGATATG ACGGCGCTGT GGGAGGCAAG CCTAAACGGT
ATCTGCCATA AAGAAATCTC ATATCACGGG TTTATGCAGC CACTGCTGGG GACGCTAAAT
AACTTAATCG AAAATGCAGG CGCTCAATTA CCCTCAGCCC TCAATGGCTT AAAAGGGCAG
GGCTTTAAGC GTGCCGCGAC TAAAAAGTCC GGTTATCGAA AAGCCGGAAC CAGAGGCGCT
GCAGGCGGGA AAAAAGCCGG AACGGGCGCT AAAAAAGGGA ATGCTAGCAA TTCGGCCGCA
GCATCTTCTA CCTCCACGAC AGCTAAACCG ACTGCCCCTA GGCGGCGAAC GAGCAAAGTG
CCTGCCCAAG CTTGA
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| Protein sequence | MILYIAEKPS LGRAIADVLP KPHKKGDGFI EDAQGNCVSW CVGHLLEQAE PDAYNPEFKS
WKFEHLPIVP EKWQLKPKAA TRSQLTVLKK LVKQADTLVN AGDPDREGQL LVDEVIAYLG
VTGDKLQQTQ RLLISDLNPQ AVKRALSQLR SNREFIPLST SALARSRADW LYGMNMTRAY
TIQGKKVGYQ GVLSVGRVQT PLLGLIVRRD EEIANFQSKP FYEVLAHLVT DKDQTFTAKW
QPSEACLPYM DEEGRVLAKG LAQNVVRRIT DKPAKVTQLS TKDKQQNPPL PYSLSALQID
AAKRFGMSAK DVLDTCQSLY ERHKLITYPR SDSRYLPTEQ HALASGVLAA IMGGAPELVA
HAEAPNPRLK SKAWDDKKVD AHHAIIPTEK QPNLAGLSQR ERQLYLHIAR QYLAQFYPAY
CYSETAVEVT IEGGLFKTKA KQDKSLGWKQ LFAREENERK DASSAASFAQ GDKDAEEGEY
VGQLPPLTLG QVLHCHQGEL VEKQTQPPKA FTDATLLSAM TGINRYVTDP EIRKILKETD
GLGTEATRAG IIELLFKRGF IQRQGKSIVA TEIGKGLINS LPISATTPDM TALWEASLNG
ICHKEISYHG FMQPLLGTLN NLIENAGAQL PSALNGLKGQ GFKRAATKKS GYRKAGTRGA
AGGKKAGTGA KKGNASNSAA ASSTSTTAKP TAPRRRTSKV PAQA
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