| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1474 |
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| Symbol | |
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| ID | 4478111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1712516 |
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| End bp | 1714438 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639726044 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_869114 |
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| Protein GI | 117919922 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.123359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCAAT GGGGATTGGG CGATGGACTC GAGCTGCTCT CTTTACTGCA TCACTGGCAA
ACGCAGACTC AAAGCAACAC ACGGCTGTTA GTGAAAGTGT TTGAGCCCAA TCCCATTAAC
GATTACGAAC TTAAATTACT TTGGGATCAA TCGCAAAGCT TAATTTCCAC GCCTCATTTA
CAACCGATTG CCAATGCCAT CCTTAAGGCA AAACCTGCGC GCATTATAGG GTGCCAGAGA
TTAATCTTTG ATGACGGCCG CATCACGGTC GATTTACATT TTGGCGACCT GCACACCTCA
CTCACCAATT TGCCCCACAG CCCTGCTCAT CCTATTCAGC AATGGCTGGT TTTACCGCAT
TTGGCATCGC AGTTAAGCGG CAAACTAGCG TGGCAAATGG CGCGTTTAAG TGCCGATGAT
GCCCAGCTGA TTGGGGTCAA TTTGGCAGAA ACCGTGCAGC AGCTTGCCCA CAGCAGTGGC
TTTAGCACCC TTAATGTCAG CCAAGATGCC TTGAATGGTG ATGCAAGTGA CGCACTGCCA
AGCCAGATTA TCACCGATGA GATTTTGCTC CATGAGCGCA AACTGCTGCG CCAACAAGCC
GATACCGCTC AGGCATTTAC CCCAAAACCT GCCACGCTCG CGGCTATAGA TCACCCTGTT
GCCATCGTCG GTGGCGGACT GGCCTCAGCG AACCTAATGC TATCCCTCGC CGAACGAGGC
CAGAGTAGCA CATTGTTTTG TAAGGATAAT GAGTTAGGTC AAGGCGCATC AGGCAATCGT
CAAGGAGCAA TTTACCCCCT ACTCACGCCT GAAAATGATG AGCTTAGCCG TTTTTTCCAA
CAGGCCTTTT TGTTCAGCCG CCGCCGTATT GAGGCGCTGA GCCAAGCGTC GATGATGGAT
ACAAACGCCG CCCCTCATGT TACGGTGATT TCCCATGATT TTTGTGGGGT ACTGCAAACG
GGTCATGATG AGCGCAGCCA ACAACGGCTG GATAAAATCA TCCAAAGTCA GGACTGGCCG
GCGGAAATCG CCTACGCCGT TGATGCGAAT GAAGCCAACG AAATAGCCCA AATAGGTATT
GATAAGGCTG GATTTTTTTA TCCACTCGGA GGCTGGGTAT GCCCATTTGA ATACGCCAAG
GCGGCGGTGG ACAAGGCCTC GCAACTTGCC AATGTGCAGT GCCATTTCAA TACCGAGATC
ACCGAAATTG AATGTGATGC ACAGGCTTGG TATCTTCACA GTCAAGGCCA GCGTTTTGGA
CCATTCCGCC AACTCGTGCT CGCCAATGGC GCGCAGCTCA CCCAATTTTC GGCCAGTGAG
CGATTACAGA TAAGTCCGTT TCGCGGCCAA GTGAGCCACG TCCCCGCCCA ATTTAAATTG
AGCCAATTGG CGACAGTGTT ATGTGCGAAC GGTTATCTCA CGCCGAGTCA TCAAGGCTTG
CATTGCCTCG GCGCCAGTTA TGTCAAAGCG GCAGAGCACT TCGATTTTTG CCCGCAGGAG
CAACGGGAAA ACCTCGGGAA AATGCAAGAA AGCTACCCCA ACCAAGCCTG GGTTGACGAT
ATCGATATCA GTGGCAATAG CGCTCGTGTC GGCGTGCGGA TGGTGACGCG GGATCATTTC
CCCATGATGG GCTGTGCGCC CGATGTGGCT GAAATATTGG CGCGCTATGA ACTGCATCAA
CTCAATCAAC AGCAGGCCGA ACAAAGCAAG CATTATTGGC AAACAACCCC CGCGCCTATC
CTCGATGGCC TTTATATTTT GGGTGGTTTA GGGTCGCGGG GATTAAGTTC AGGCCCCTTG
GCGGCCGAAT GCTTGGCGGC ACAGTTAACC GGAGAGCCGC TGCCACTGGA TTGGTCAACC
TTAAATAAAC TCAACCCCAA TCGGATGTGG CTACGCAAAT TACTAAAGGG GAAAGCGCTT
TAA
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| Protein sequence | MGQWGLGDGL ELLSLLHHWQ TQTQSNTRLL VKVFEPNPIN DYELKLLWDQ SQSLISTPHL
QPIANAILKA KPARIIGCQR LIFDDGRITV DLHFGDLHTS LTNLPHSPAH PIQQWLVLPH
LASQLSGKLA WQMARLSADD AQLIGVNLAE TVQQLAHSSG FSTLNVSQDA LNGDASDALP
SQIITDEILL HERKLLRQQA DTAQAFTPKP ATLAAIDHPV AIVGGGLASA NLMLSLAERG
QSSTLFCKDN ELGQGASGNR QGAIYPLLTP ENDELSRFFQ QAFLFSRRRI EALSQASMMD
TNAAPHVTVI SHDFCGVLQT GHDERSQQRL DKIIQSQDWP AEIAYAVDAN EANEIAQIGI
DKAGFFYPLG GWVCPFEYAK AAVDKASQLA NVQCHFNTEI TEIECDAQAW YLHSQGQRFG
PFRQLVLANG AQLTQFSASE RLQISPFRGQ VSHVPAQFKL SQLATVLCAN GYLTPSHQGL
HCLGASYVKA AEHFDFCPQE QRENLGKMQE SYPNQAWVDD IDISGNSARV GVRMVTRDHF
PMMGCAPDVA EILARYELHQ LNQQQAEQSK HYWQTTPAPI LDGLYILGGL GSRGLSSGPL
AAECLAAQLT GEPLPLDWST LNKLNPNRMW LRKLLKGKAL
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