Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1461 |
Symbol | fadJ |
ID | 4479678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1694533 |
End bp | 1696662 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639726031 |
Product | multifunctional fatty acid oxidation complex subunit alpha |
Protein accession | YP_869101 |
Protein GI | 117919909 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000722255 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAAAGA CATTTAATTT AACCCGCCGT GAAGACGGTA TCGCCATTCT AATGATGGAC GTACCCGGCG AAACCATGAA TACCCTCAAG GCAGAGTTTG GCCCTGAGAT CAGTGAGATC CTGTCTGAGA TTAAACGCGA TAGCAGTATC CGTGGCCTAG TGCTGATTTC GGGTAAAAAA GACTCCTTCG TAGCTGGGGC GGATATTTCT ATGCTCGACG CTTGCCAAAC GGCGGGCGAT GCGAAAGCCT TATCCCAGCA AGGGCATGTG GTGTTTAACG AGTTAGAAGC CTTGAATATC CCTGTGGTTG CCGCGATACA TGGCGCCTGT TTAGGGGGCG GTCTTGAGCT TGCGCTTGCC TGCCATCAAC GTGTGTGCAG TGATGACGGC AAGACCATGT TGGGCGTACC CGAAGTGCAA CTCGGTTTGT TACCCGGTGG CGGCGGTACT CAGCGTTTGC CTCGTTTAGT GGGGATCACT ACTGCGCTGG ATATGATGTT GACGGGTAAA CAAATTCGTC CTAAACAAGC GTTAAAGATG GGCTTAGTTA ACGATGTGGT GCCACAGACA ATTTTACTGC AAACCGCAGT GGAGATGGCG CTCGCGGGTA AGCGCACGGC GAAACCAGTT AAAAAATCTC TGGTTAATCA ATTACTCGAA GGCACAGGGT TTGGTCGTAA CATTATTTTC GATCAAGCTG CCAAGCAAGT CGTTAAGAAA ACCCAAGGTA ACTATCCTGC ACCAGCAAAA ATTATTGATT GCGTGCGCCA AGGTATGGCG AAGGGAATGC AGAAAGGGCT TGAGGTGGAA GCCAGCCATT TTGCTGAGCT GGTGGTGTCG AAAGAATCTG AGGCGCTGCG CAGTATTTTC TTTGCCACTA CAGAGATGAA GAAAGAAACT GGCGCCGAAG GGGCGACACC ACGTAAAGTC AAAAAAGCCG TGATCTTAGG TGGCGGTTTG ATGGGCGGTG GTATTGCTTC GGTCACGACG ACTAAGGCGA AAATTCCTGC GCGGGTAAAA GACATTAACG AAAAGGGCTT AAGCAATGCG CTTTCTTACG CCTATAAGTT ATTGGATAAA GGCGTTAAAC GTCGTCATAT GACGCCGGCC GTTCGCGACA ATTTAATGGC ACTGATGACA ACGACGACCG AATATAAAGG CGTTAAGGAC GCTGATATTG TTGTTGAAGC CGTATTTGAG GATTTAGCGC TTAAACATCA GATGGTTAAA GATATTGAGC GTGAATGCGG CGAGCACACG ATTTTTGCAT CTAACACCTC ATCTTTACCC ATTGGCCAAA TTGCACAGGC GGCCAGCCGT CCTGAAAATG TGATTGGCTT ACATTATTTC TCACCAGTAG AAAAAATGCC GCTGGTGGAA GTGATTGCCC ATGCGAAAAC GTCTCCTGAG ACGATTGCCA CCACAGTGGC CTTTGCCCGC AAACAGGGTA AAACGCCAAT CGTGGTACAA GACGGTGCCG GTTTTTATGT TAACCGTATC CTCGCGCTGT ATATGAACGA AGCTGCACAA TTACTGCTGG AAGGCCAGAG TATTGAGCAC TTAGACAAAG CCTTAGTGAA GTTCGGTTTC CCCGTTGGCC CTATCACTTT GCTCGATGAA GTGGGTATCG ATGTCGGTGC TAAAATCGCT CCAATCCTTG AAAAAGAACT GGGCGAGCGC TTTAAAGCCC CAGCAGCCTT CGATAAGTTA CTGAGCGATG ATAGAAAAGG CCGTAAAAAT GGCAAAGGTT TCTATCAATA TGCTGCTGGC AATAAAGCGT CGAGCAAGAA GAAAGCCGTG GATGAAAGTG TTTACGCAGT ACTTGGCATC AAGCCAGGTA TGGACAAAGA CTTAAGTGCT GTGGCCGAGC GTTGTGTGGT GCAAATGCTC AATGAAGCAG TACGTTGTTT AGATGACGGC ATTATTGCTT CCCCGCGTGA TGGTGATATT GGCGCCATTT TCGGTATTGG TTTCCCACCA TTCTTAGGTG GCCCATTCCA CTATATTGAT ACCCTAGGTG CCGATAACTT GGTCAACATA CTGGAACGTT ATCAAGCTCA ATACGGCGAC CGATTTGAGC CATGCCCACG TCTTAAGGCG ATGGCGGCAG AAAAGGCTCG TTTCTTCTAA
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Protein sequence | MEKTFNLTRR EDGIAILMMD VPGETMNTLK AEFGPEISEI LSEIKRDSSI RGLVLISGKK DSFVAGADIS MLDACQTAGD AKALSQQGHV VFNELEALNI PVVAAIHGAC LGGGLELALA CHQRVCSDDG KTMLGVPEVQ LGLLPGGGGT QRLPRLVGIT TALDMMLTGK QIRPKQALKM GLVNDVVPQT ILLQTAVEMA LAGKRTAKPV KKSLVNQLLE GTGFGRNIIF DQAAKQVVKK TQGNYPAPAK IIDCVRQGMA KGMQKGLEVE ASHFAELVVS KESEALRSIF FATTEMKKET GAEGATPRKV KKAVILGGGL MGGGIASVTT TKAKIPARVK DINEKGLSNA LSYAYKLLDK GVKRRHMTPA VRDNLMALMT TTTEYKGVKD ADIVVEAVFE DLALKHQMVK DIERECGEHT IFASNTSSLP IGQIAQAASR PENVIGLHYF SPVEKMPLVE VIAHAKTSPE TIATTVAFAR KQGKTPIVVQ DGAGFYVNRI LALYMNEAAQ LLLEGQSIEH LDKALVKFGF PVGPITLLDE VGIDVGAKIA PILEKELGER FKAPAAFDKL LSDDRKGRKN GKGFYQYAAG NKASSKKKAV DESVYAVLGI KPGMDKDLSA VAERCVVQML NEAVRCLDDG IIASPRDGDI GAIFGIGFPP FLGGPFHYID TLGADNLVNI LERYQAQYGD RFEPCPRLKA MAAEKARFF
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