Gene Shewana3_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1449 
Symbol 
ID4479666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1680474 
End bp1680860 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content48% 
IMG OID639726019 
Producthypothetical protein 
Protein accessionYP_869089 
Protein GI117919897 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000745945 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000491458 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCAAAAG TCATTGGACT TGGTGGTATT TTTTTTAAAA GTACTGATCC CGTCGCGTTA 
GCCACTTGGT ATCAAACCCA TCTGCAAATA CCGATTGAAA ACTGGGGCGG CGCGGCTTTT
TATCATAACG ATAAACCCAC GCCCGGTTAC CATGTGTGGA CCCCCTTCGA CCATAACACT
AGCTATTTTG CCCCGACTGA TAAAAGCTTT ATGGTCAATT TTATCGTTGA CGATCTGGAG
CAGGCCCTAC AGCAAGTCTC TCAGGGCGGC GGTGAACAGA TTGGGGAGAT TGAAGACTCG
GAATTTGGCC GTTTCGGTTG GTTTATCGAC CCCGATGGCA ATAAAGTCGA ATTATGGCAG
CCAAGTCCAA CGCCGCCAGC CAATTAA
 
Protein sequence
MAKVIGLGGI FFKSTDPVAL ATWYQTHLQI PIENWGGAAF YHNDKPTPGY HVWTPFDHNT 
SYFAPTDKSF MVNFIVDDLE QALQQVSQGG GEQIGEIEDS EFGRFGWFID PDGNKVELWQ
PSPTPPAN