Gene Shewana3_1441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1441 
Symbol 
ID4479658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1669846 
End bp1670757 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content54% 
IMG OID639726011 
Productsiroheme synthase 
Protein accessionYP_869081 
Protein GI117919889 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 
TIGRFAM ID[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00378559 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000222873 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAATATT TCCCGCTGTT TATTGATACT GTGAATTTAA ATGTCCTGTT AGTGGGGGCG 
GGGGATGTTG CCAGTCGTAA GCTGGCTTTG CTGACGCGTA CCGAAGCCAA TATCCATGTG
ATTGCCCCCG AGGTGAATCC CGAGGTAAAG GCCTATGCCG ATGCAGGCAG GATTTTATTG
TCTGAGCGGC CCGTGGTGCA GGCCGATATT CAAAATTACG ATCTCATTTA TTTAGCGACC
GCGAACGATA AGCTCAATGC TGAATTAGCC ACCTTAGCTA CCGAGCGGGG AATTTGGGTC
AATGCCGTGG ATAATCCCGC CTATTGCCGC TTTATTACCC CATCGATTGT CGATAGGGGA
CGTCTTGTGG TGGCGATCAG CACTGCGGGT GCAGCGCCTG TGTTTGCGCG CACCATTCGA
GCTCGTTTAG AGACCAGCCT GCCGCAATCG CTTAAGCCCT TGTTTGACTT TGTGGCCGAC
AAGCGTCTCG AAGTGCAGCA AAGACTCACT AAAACCGCGA CGCGCCGATT ATTCTGGGAA
CGCTTTTTCG ACACCAATGG CGATAGATTT GATGCGCGAA CCCCCGAGCA TTATCAGAAT
GCTTTTAACC ATATCGTCAG CCGCGGGGAA ATCCTGTTAT TGGACGATGC TACGCCCGTC
GAGTTATTGC CGCTGGCGGC CATGCCGTTA TTACAGCGCC TCGATTGGAT TTACAGCGAA
GCAGGTTTAG CCGAGGACTT GGCCGAGCTG GTGCGCCGCG ATGCTAATCG TGCAGCGCTT
CCCGCGCTGA GTGATATCAG CCGGGAATAT GAGCAAGGCT CGCGGATGTT GTTGGTCGCC
GATACCCAGA AGATTGCGCA ACTTAAGGCG CATTTCCCGG TGGCGAAGCA TTTACGCCCC
GGCGCGATTT AG
 
Protein sequence
MQYFPLFIDT VNLNVLLVGA GDVASRKLAL LTRTEANIHV IAPEVNPEVK AYADAGRILL 
SERPVVQADI QNYDLIYLAT ANDKLNAELA TLATERGIWV NAVDNPAYCR FITPSIVDRG
RLVVAISTAG AAPVFARTIR ARLETSLPQS LKPLFDFVAD KRLEVQQRLT KTATRRLFWE
RFFDTNGDRF DARTPEHYQN AFNHIVSRGE ILLLDDATPV ELLPLAAMPL LQRLDWIYSE
AGLAEDLAEL VRRDANRAAL PALSDISREY EQGSRMLLVA DTQKIAQLKA HFPVAKHLRP
GAI