Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1441 |
Symbol | |
ID | 4479658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1669846 |
End bp | 1670757 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639726011 |
Product | siroheme synthase |
Protein accession | YP_869081 |
Protein GI | 117919889 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
TIGRFAM ID | [TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00378559 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000222873 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAATATT TCCCGCTGTT TATTGATACT GTGAATTTAA ATGTCCTGTT AGTGGGGGCG GGGGATGTTG CCAGTCGTAA GCTGGCTTTG CTGACGCGTA CCGAAGCCAA TATCCATGTG ATTGCCCCCG AGGTGAATCC CGAGGTAAAG GCCTATGCCG ATGCAGGCAG GATTTTATTG TCTGAGCGGC CCGTGGTGCA GGCCGATATT CAAAATTACG ATCTCATTTA TTTAGCGACC GCGAACGATA AGCTCAATGC TGAATTAGCC ACCTTAGCTA CCGAGCGGGG AATTTGGGTC AATGCCGTGG ATAATCCCGC CTATTGCCGC TTTATTACCC CATCGATTGT CGATAGGGGA CGTCTTGTGG TGGCGATCAG CACTGCGGGT GCAGCGCCTG TGTTTGCGCG CACCATTCGA GCTCGTTTAG AGACCAGCCT GCCGCAATCG CTTAAGCCCT TGTTTGACTT TGTGGCCGAC AAGCGTCTCG AAGTGCAGCA AAGACTCACT AAAACCGCGA CGCGCCGATT ATTCTGGGAA CGCTTTTTCG ACACCAATGG CGATAGATTT GATGCGCGAA CCCCCGAGCA TTATCAGAAT GCTTTTAACC ATATCGTCAG CCGCGGGGAA ATCCTGTTAT TGGACGATGC TACGCCCGTC GAGTTATTGC CGCTGGCGGC CATGCCGTTA TTACAGCGCC TCGATTGGAT TTACAGCGAA GCAGGTTTAG CCGAGGACTT GGCCGAGCTG GTGCGCCGCG ATGCTAATCG TGCAGCGCTT CCCGCGCTGA GTGATATCAG CCGGGAATAT GAGCAAGGCT CGCGGATGTT GTTGGTCGCC GATACCCAGA AGATTGCGCA ACTTAAGGCG CATTTCCCGG TGGCGAAGCA TTTACGCCCC GGCGCGATTT AG
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Protein sequence | MQYFPLFIDT VNLNVLLVGA GDVASRKLAL LTRTEANIHV IAPEVNPEVK AYADAGRILL SERPVVQADI QNYDLIYLAT ANDKLNAELA TLATERGIWV NAVDNPAYCR FITPSIVDRG RLVVAISTAG AAPVFARTIR ARLETSLPQS LKPLFDFVAD KRLEVQQRLT KTATRRLFWE RFFDTNGDRF DARTPEHYQN AFNHIVSRGE ILLLDDATPV ELLPLAAMPL LQRLDWIYSE AGLAEDLAEL VRRDANRAAL PALSDISREY EQGSRMLLVA DTQKIAQLKA HFPVAKHLRP GAI
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