| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1430 |
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| Symbol | |
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| ID | 4479647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1660536 |
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| End bp | 1661207 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726000 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_869070 |
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| Protein GI | 117919878 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0041219 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGATAT TTGATTACCA GCCCCCTTCA GTCCCTTGGT TAGATCTTCG CTATCAAGAT
AGGGATTTGA TCATTATTAA TAAACCTTCT GGATTGTTGT CTAATCCCGG CCGAGCCGCA
CATACCTTCG ATTGCGCCCT CACCCGGCTA CAACGCTTGT ATCCTGACAC TATTCTCGTG
CATCGACTCG ATTGTGCTAC CTCAGGCATT ATGGTGTTTG CCCGCAACAA AAAGGCCGAG
TCCCAGTTAA AAACCCAGTT CCAAGATAGG CAAAACGAGA AAGTGTATAT CGCCGAAGTC
ATGGGGGGGA TAGCAAAGGA TGCAGGGATA ATCGATTTAG CTATCGCGCC CGATCCCGAG
CACCCGCCCT ATCAAAAGAC GCAAACGCCG GGAACGGCTG GCGCGAAGAG TGCTCTAACC
CATTACCGAG TGCTAGAAAG ACGCGAAAAC AGCACCTTAG TCGAGTTAAC GCCACAAACG
GGCCGAACCC ACCAACTGAG GGTGCATATG CTCGCCCTGG GGCATCCCAT TCTTGGGGAT
GAATTTTATG GCGATGATGA GGTGATAAAG GCCAGACCGA GACTCTGTCT TCACGCCCAA
AGTTTACGTT TTACCCATCC TTACTCGGGT AAAGCCATGC ATTTTTACAG TAAGCATCCC
TTCTCGGCTT AG
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| Protein sequence | MQIFDYQPPS VPWLDLRYQD RDLIIINKPS GLLSNPGRAA HTFDCALTRL QRLYPDTILV
HRLDCATSGI MVFARNKKAE SQLKTQFQDR QNEKVYIAEV MGGIAKDAGI IDLAIAPDPE
HPPYQKTQTP GTAGAKSALT HYRVLERREN STLVELTPQT GRTHQLRVHM LALGHPILGD
EFYGDDEVIK ARPRLCLHAQ SLRFTHPYSG KAMHFYSKHP FSA
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