Gene Shewana3_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1405 
Symbol 
ID4479002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1622695 
End bp1623444 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content46% 
IMG OID639725960 
Productelectron transfer flavoprotein beta-subunit 
Protein accessionYP_869045 
Protein GI117919853 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000200993 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAT TGGTGCCTGT TAAGCGCGTA GTTGATGCCA ATGTGAAGGT CAGGGTAAAA 
GCTGACAACA CCAGCGTTGA TACCGCAAAC CTCAAAATGG CGTTGAACCC TTTTTGTGAA
ATTGCAGTAG AAGAAGCGGT TCGTTTAAAA GAAGCGGGCA GTGCTACTGA AGTAGTGGTC
GTCAGTATCG GCAATAAAGC CGTTCAAGAA CAATTGCGTA CCGCGTTAGC ACTAGGTGCT
GACCGTGCGA TTCACATTGA TACTGAAGAA GAGTTAACCC CAGTATCGAT TGCCAAATTA
CTCAAAGCCG TACAAGAAAA AGAACAAGCG CAATTAGTGC TGTTTGGTAA GCAATCTATC
GATGGCGATA ATAACCAAAC TGGCCAAATG TTTGCGGCAT TAACGGATAT GCCACAAGCC
ACTTTTGCTT CTGAAATCAA AGTCGAAGGT CATTCAGTGC AAGTGGCTCG CGAGATAGAT
GGCGGGATGC AAACCTTAAG TCTGCCGCTG CCAGCTGTGG TGACTGCCGA TTTACGTTTG
AACGAACCTC GTTACGCTTC ATTGCCTAAC ATCATGAAAG CTAAACGTAA GCCATTAGAT
GTGCTCACTG TTGCGGATTT AGGTGTGACG CTAAAAGCCC ATCAAACTGT GGTGAAGGTG
ACGCCACCTG CCGAACGTAA GGCGGGCATC ATGGTTGCGT CGGTAGCTGA GCTGGTTGAA
AAGTTAAAGA ATGAAGCGAA GGTGATCTAA
 
Protein sequence
MKVLVPVKRV VDANVKVRVK ADNTSVDTAN LKMALNPFCE IAVEEAVRLK EAGSATEVVV 
VSIGNKAVQE QLRTALALGA DRAIHIDTEE ELTPVSIAKL LKAVQEKEQA QLVLFGKQSI
DGDNNQTGQM FAALTDMPQA TFASEIKVEG HSVQVAREID GGMQTLSLPL PAVVTADLRL
NEPRYASLPN IMKAKRKPLD VLTVADLGVT LKAHQTVVKV TPPAERKAGI MVASVAELVE
KLKNEAKVI