| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1404 |
|---|
| Symbol | |
|---|
| ID | 4479001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1621992 |
|---|
| End bp | 1622384 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639725959 |
|---|
| Product | histone family protein nucleoid-structuring protein H-NS |
|---|
| Protein accession | YP_869044 |
|---|
| Protein GI | 117919852 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2916] DNA-binding protein H-NS |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000773951 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.9865 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAT TTTTAGAGAT ATTAACTCAC GGTCGTCGTT TTAAAGCTGC AGTAAAAGAT
CTCAGCATTG AAGAACTGCG AGATTTAGCG GCTAAGCTAG ATAAAATTTT AGTTGAGCGT
GAGTCAATGG CAGCAGAAGA GCAGCAAGCT ATTGCTGCAC GTAATGCTAA AATCGAAGAA
ATCCGCCAAC AAATGGAAGC AGTTGGTTTA TCAATCGACG ACTTAGGTGG CGTTGCAGTT
AAAGCTGCAG GTAAAAAACG CGCTCCACGT CCAGCAAAAT ACCAAATCGA AGTAAACGGC
GAAGTGATCC AGTGGACTGG TCAAGGTCGT ATGCCAACGG TATTTAAGAA CGAAGTCAAT
AAAGGCCGTT CTATGGATGA TTTCTTAATC TAA
|
|---|
| Protein sequence | MSEFLEILTH GRRFKAAVKD LSIEELRDLA AKLDKILVER ESMAAEEQQA IAARNAKIEE
IRQQMEAVGL SIDDLGGVAV KAAGKKRAPR PAKYQIEVNG EVIQWTGQGR MPTVFKNEVN
KGRSMDDFLI
|
|---|
| |