| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1382 |
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| Symbol | |
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| ID | 4478979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1597487 |
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| End bp | 1598038 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639725937 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_869022 |
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| Protein GI | 117919830 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.439058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000218854 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGATAA TTAATACTAA AATTCCAGAT GTAAAAGTAA TTGAACCAAA AGTGTTTGGT
GATGAACGTG GTTTTTTCAT GGAGACTTGG AACCAGAAGC AATTTGAAAA TTTAGTAACG
GGTAAGTCTA CTACTTTTGT ACAGGATAAT CACTCAAAAT CTAAAAGGGG TATACTCCGA
GGGTTGCATT ATCAAACTAA AGATACTCAA GGTAAATTAG TTAGAGTGAT TAGTGGTGAG
GTATTTGATG TAGCAGTTGA CATCCGTAAG GACTCGCCCA CATTCGGACA ATGGGTTGGA
GAGTATCTTT CTGCAGAAAA TAAGCGCCAG TTATGGATAC CAGAAGGTTT TGCTCATGGT
TTCTATGTTA TTTCTAATGA ATGTGAATTT GTCTATAAAT GCACGAAATA CTATAATCCA
AATTATGAAA AATGTTTAAT ATGGAATGAT TCTAATCTTC AGATTGATTG GCCTATCCCC
GAAACTGAAA GAGTATTGCT TTCATCTAAA GACTCAAATG GAATACCATT TGATAAAATT
CAGTATCTTT AA
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| Protein sequence | MKIINTKIPD VKVIEPKVFG DERGFFMETW NQKQFENLVT GKSTTFVQDN HSKSKRGILR
GLHYQTKDTQ GKLVRVISGE VFDVAVDIRK DSPTFGQWVG EYLSAENKRQ LWIPEGFAHG
FYVISNECEF VYKCTKYYNP NYEKCLIWND SNLQIDWPIP ETERVLLSSK DSNGIPFDKI
QYL
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