Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1377 |
Symbol | |
ID | 4478285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1592670 |
End bp | 1593659 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639725932 |
Product | sugar transferase |
Protein accession | YP_869017 |
Protein GI | 117919825 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.643724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000754097 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATATAC GAGTTAATGA AACGGTTGAC ACTCATGAGT TTCAGCCGAT TAAAACAGTT GCGAAGCGTT TCAAGTCAAA GTATCAGGTG CTAAATCAGC TGCTTATTTA TGTCTATTGT CCTGTGGATA GAGAATTAGA GATTGGTCAA ATTATTGATG ACTACAGCTT TGATATGGTT GTCAATGATT ACAGCATTAC TGATTTGAGT TGTAAGGTTA TTTGTCATTT TGAAAGCGCG CGTTTGACTA AAGAACAGAG ACAGTTTCTT GTCAAAGCGA CTGAACTTGG TGCTTGGGTA GAGCCTTTAG TTAGCTATCT TGATGAAAGA CTTGGCTATA CTGAGGTCCG ATTACTACAT AGTGGCTATT TTCTACATCA GAAAGCTTTT TCCATTTTAT CGACAAAGCG TACTCAATTA GCTAAAAGAG TTGTTGATTT ATTTGCGGCG TTTCTGCTTT GTACTGTAGC AATACCTGTC GGATTACTTA CAGCATTGGC GATTAAGTTA GAAAGTCCAG GGCCAGTATT TTATAAACAG CGACGTACAG GACAATATAA TGACGAATTT GAAGTGATTA AATTTCGTTC TATGCGTAAT GATGCTGAAA AGTCTGGTGC GCAATGGGCT ACTCAAAATG ATGCTCGTGT TACAAAAGTA GGTAACTTTA TTCGTAAGAC CCGCATCGAT GAATTACCGC AGATCATCAA TATTCTGAAA GGTGAAATGT CGATTGTTGG TCCGAGACCA GAGCGTGAGG TCTTTATTGC AGAATTAGAA CAAGAAATTC CTTATTATCG CTTCCGCCAC GCAGTTAAAC CCGGTGTAAC GGGTCTCGCC CAAGTCAGTT ATCCATACGG TGCTTCTGTT GAGGATGCGG TTTGGAAGCA TAAGTATGAT ATTTTTTATA TTAAACACCA CAGTACTTTA TTAGATGTGA AAATTTTACT TAAAACAATT AAAGTTGTTT TATTTGGCAT GGGACGATAA
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Protein sequence | MNIRVNETVD THEFQPIKTV AKRFKSKYQV LNQLLIYVYC PVDRELEIGQ IIDDYSFDMV VNDYSITDLS CKVICHFESA RLTKEQRQFL VKATELGAWV EPLVSYLDER LGYTEVRLLH SGYFLHQKAF SILSTKRTQL AKRVVDLFAA FLLCTVAIPV GLLTALAIKL ESPGPVFYKQ RRTGQYNDEF EVIKFRSMRN DAEKSGAQWA TQNDARVTKV GNFIRKTRID ELPQIINILK GEMSIVGPRP EREVFIAELE QEIPYYRFRH AVKPGVTGLA QVSYPYGASV EDAVWKHKYD IFYIKHHSTL LDVKILLKTI KVVLFGMGR
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