Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1373 |
Symbol | |
ID | 4478281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1585825 |
End bp | 1587294 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639725928 |
Product | amino acid/peptide transporter |
Protein accession | YP_869013 |
Protein GI | 117919821 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000302128 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000791426 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGTAG CAAAACCACA AGGGACGATG CTTGGTCATC CCAAGGGCCT GTTCCTTCTA TTTACAACAG AACTGTGGGA ACGTTTTAGT TATTACGCAA TGCGCGCCAT TTTGGTGCTG TATTTAGTGG ACAAAGTGCA GAGTGAAGGG GGACACGGTT TAGGTTGGAC GCAAGCCGAT GCGATTTCAC TCTATGGTAC ATTCACTGGC CTAGTTTACT TAACGCCGCT TATCGGTGGC TGGTTAGCAG ACACCTTTTT AGGCCAACGC CGCGCGATTA TGATTGGCGG TACTTTAATG GCCGCAGGTC AATTTATTCT CGGTACGCCG CACGCTTGGG TACCTGGTAT GGAAACCGAA GTTTTCTATG TCGGCTTAGG AACCTTGATC TTAGGTAACG GCCTATTCAA GCCGAATATC TCTACCATGG TAGGCGATCT GTACGAAGAA GGTGATCATC GCCGTGACGG TGCATTCACC ATTTTCTATA TGGGGATCAA CGTCGGTGCT TTCCTATCGG GTATTATCGT AGGTTCTGTG GTGGCGGCTT ATGATGGCAA CTTCCAAGCC GGCTTTATCT GTGCCGGTAT TGGTATGATC CTGTCATTAA TCATCCAACT TGTGTTTGCG CAAAAGCTAC TTGGTGATAT CGGTAGAACC CCAGCTGCTA AGCTTGAAAA GCAAAAAGCG GCAGAAAAAG GCGAAGTTCG CAAAGAGCCA CTCACCAAAG TTGAGCGTGA CCGTATTAAA GTCATCATGG TGATGGGCTT ATTTACCATC ATCTTCTGGG CGGGGTTTGA ACAAGCTGGC GGCTTGATGA ACCTGTTCAC GAATGACTTT ACCGACCGTA TGATCGGTAC TTGGGAAGTT CCTACCACTT GGTTCCAATC CTTGAACGCG ATGTTTATCG TGATTTTTGC ACCTGTTGTA GCCTCGATTT GGGTACGCTT AGGTAAGAAT GAACCAAACT CGCCTGTTAA GTTTGCTTTA GGCTTAGTGC TATTAGCCGT TGGCTTCTTA TTCATGATCG GTGCCGTTGT TGAGATGGGT GGCGATGCTT CAGCGAAATC GAGCATGTGG TGGTTAGTCG GTGCTTATTT CTTCCACACC ATGGGTGAGC TTTGCTTATC ACCAATTGGT TTATCTATGG TGACTAAGCT AGCCCCATTA CGTATAGCTT CATTAATGAT GGGTTCTTGG TTCCTGTTCG TTGCTGCAGC TAACAAGATT GGTGGCGTAG TGGGTTCATT CATCGGCCAC GGCGGTGAAA AAGAAGAACA ACTCGCCAAT GCAATGGCCA TTTTCTCGGG TATCGCGATT ACTGCAGCAC TTTCTGGTGT GGTCTTATAC TTCATGGCCG ACAAACTTGT GGATTGGATG CATGGTGCAG AAAGCAAGCA TCACAACGAA GCTGAAGCGT TAGAAGATGA AATCGCCGTT ACCGGTGAGC ATGAAGCGAT CAAACGTTAA
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Protein sequence | MSVAKPQGTM LGHPKGLFLL FTTELWERFS YYAMRAILVL YLVDKVQSEG GHGLGWTQAD AISLYGTFTG LVYLTPLIGG WLADTFLGQR RAIMIGGTLM AAGQFILGTP HAWVPGMETE VFYVGLGTLI LGNGLFKPNI STMVGDLYEE GDHRRDGAFT IFYMGINVGA FLSGIIVGSV VAAYDGNFQA GFICAGIGMI LSLIIQLVFA QKLLGDIGRT PAAKLEKQKA AEKGEVRKEP LTKVERDRIK VIMVMGLFTI IFWAGFEQAG GLMNLFTNDF TDRMIGTWEV PTTWFQSLNA MFIVIFAPVV ASIWVRLGKN EPNSPVKFAL GLVLLAVGFL FMIGAVVEMG GDASAKSSMW WLVGAYFFHT MGELCLSPIG LSMVTKLAPL RIASLMMGSW FLFVAAANKI GGVVGSFIGH GGEKEEQLAN AMAIFSGIAI TAALSGVVLY FMADKLVDWM HGAESKHHNE AEALEDEIAV TGEHEAIKR
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