Gene Shewana3_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1353 
Symbol 
ID4479486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1565520 
End bp1565789 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content46% 
IMG OID639725908 
Productflagellar biosynthetic protein FliQ 
Protein accessionYP_868993 
Protein GI117919801 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1987] Flagellar biosynthesis pathway, component FliQ 
TIGRFAM ID[TIGR01402] flagellar biosynthetic protein FliQ 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.151697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.273475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCAG AAGCGCTAAT CGATATTTTT CGCGAAGCTC TAGCCGTTAT TGTGATGATG 
GTTTCGGCTA TTGTTCTGCC TGGGCTCGGC ATTGGCTTAA TTGTGGCGGT GTTTCAAGCC
GCGACCTCAA TTAACGAACA GACTTTAAGC TTTTTACCTC GATTGATAGT GACCTTACTG
GCCTTGATGG TCATGGGACA CTGGTTAGTC CAAACCCTGA TGGATTTCTT TATCGAAATG
GTTAACCGCA TTCCCCAAGT GGTGGGTTAA
 
Protein sequence
MTPEALIDIF REALAVIVMM VSAIVLPGLG IGLIVAVFQA ATSINEQTLS FLPRLIVTLL 
ALMVMGHWLV QTLMDFFIEM VNRIPQVVG